Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq13 134 2e-26 >seq13 Length=863668 Score = 134 bits (148), Expect = 2e-26 Identities = 519/805 (64%), Gaps = 19/805 (2%) Strand=Plus/Minus Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340 || || || ||||| || || ||||| |||| | || ||| | | | || || | Sbjct 288418 GGCAGGGCCATAGATGCTAGGTTGCAAACAGCAACTTCATCTGGGGCTGAATACTCGATG 288359 Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTG-GA 110399 || || || || | ||||| || || || || |||||||| || ||| || Sbjct 288358 ATCTCGGTGCAGAGATTGGAGCTGCGGATTGTGCCTAAATTCTTCTGGTTGCTCTTGCGA 288299 Query 110400 GTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAAT 110459 | ||||| |||||| ||||||||| | ||| | || ||||| ||||| | | ||| || Sbjct 288298 TTGGCATG-ATCCTTGTAGAGCATGAAGGGGTTGCCGGTTTCTGTCTGAGCTTCGAGGAT 288240 Query 110460 GGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACT 110518 ||| | ||| | | || | | | | || | || |||| || |||| ||| Sbjct 288239 GGCATACCAGAGCTTCTGAGCCTTTATCTTCTG-GCGGCCGCGACCCTCAGCCTCATACG 288181 Query 110519 TGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGG 110578 | ||| | ||||||| || | ||||| ||||||| ||| || || | | Sbjct 288180 TTTCGTAGAGAGCCTCAAACTCATCACCGTAGACATCAGCAAGGCCGGGGCACTCATTCG 288121 Query 110579 GACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCC 110638 | || | || | ||| | || || || || | ||||||||| || ||||| |||| Sbjct 288120 GGCACATCAGCGTCCACTCGCCGTTCTTTTCGACACGCTTCATGAAGAGATCAGGGATCC 288061 Query 110639 ACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCT 110698 | | ||| |||| |||||||| ||| | || || | || || || || || | Sbjct 288060 AAAGGGCCAAGAAGAGGTCACGAGCGCGAACTTCCTCCTTCCCATGATTCTTTCGCAGAT 288001 Query 110699 CCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTAC 110758 | | || || | | |||||||||||||||||| ||||||| |||| || || | Sbjct 288000 CTAGGAACTCAAACACATCCGAGTGCCATGGTTCAAGATAGATGGCGAAGGCGCC---AG 287944 Query 110759 GACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAG 110812 | || ||| | || | || || || || ||| ||||||||| | ||||| | Sbjct 287943 GCCGCTTGTTACCACCTTGATCGACGTAACGAGCCGTGTTATTGAAGACACGCAGCATGG 287884 Query 110813 GAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGT 110872 ||| ||| || | ||| ||| || || || || || ||||||| ||| Sbjct 287883 GAACAATACCGTTAGATGTACCGTTAGTTCCAGCGATGTAAGAGCCCGTGGCACGGATGC 287824 Query 110873 CGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGT 110931 ||| | || | ||||| || || ||| ||| ||| ||||| ||| | | Sbjct 287823 GGTGAACATTGAGGCCAATGCCTCCAGCCATCTTTGAAATCATAGCACATGTCT-TCAAG 287765 Query 110932 GTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATC 110991 ||| ||||||| || || || ||| |||| || | | || || ||||| |||||| Sbjct 287764 GTATCATAAATTCCCTCGATGCTATCGTCCTTCATGTCGACTAAGAAACAAGACGACATC 287705 Query 110992 TGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTT-- 111049 || || | || ||||| |||||||||||||| || | ||||| ||| ||| || Sbjct 287704 TGGGGTTGCGGTGTTCCGGCATTGAAGAGTGTCGGAGAAGCATGGGTGA--AGAATTTAA 287647 Query 111050 GGGACATCTTGTTGTATGTGTCGAG 111074 ||||||| |||||| || ||||| Sbjct 287646 GGGACATGAGGTTGTAGGTCTCGAG 287622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974240434200