Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq13 232 8e-56 seq37 95.1 1e-14 >seq13 Length=863668 Score = 232 bits (256), Expect = 8e-56 Identities = 894/1392 (64%), Gaps = 27/1392 (2%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 || ||||| | ||||| ||||||||||| || || ||||||||||| || | |||| Sbjct 288940 TAAATGTTTGAAGTGTAAGGTTCAAAGCACTCGTTGTTACCCAAGATCTGCGAGGTGCTA 288881 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 || |||||||| || ||||| | |||||| || || | ||| | | |||||| | || Sbjct 288880 GCAGTTGGCATAGGAGCCATGAGAAGACTATTGCGTACACCATGCTGCTTGATCTGCTCT 288821 Query 106055 TTGAGAACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAA 106112 |||||| || |||||| | || | || || | | | ||||||||||| | || | Sbjct 288820 TTGAGAGCAGCCCAGTCCCAAAGATCAGAGGGGGT--AACATCCCACATATCGTACTGGA 288763 Query 106113 GCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCA 106172 | | |||||||| || |||||||| | || ||| | ||| | ||| ||| | Sbjct 288762 GGATGCCTTGGGAAACAGGTGAACCCTCGTAAGTAGAATAAGTACCCTCCACTTTAGCAA 288703 Query 106173 -ATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATC 106231 | || | | || || | ||||| ||||| || || ||||| | || | | Sbjct 288702 TCTCCATTGAT-GCAGTCAAAGCAGCGTGGTACATAGTCTCGAAGATCTGCTTGTTGAGC 288644 Query 106232 TCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCT 106291 | | || || ||| ||||| | |||| | || ||| || |||||| Sbjct 288643 TGCCGAGCCTCTGGTGATTCAAAAGGCATGCGGAGGGCGAGGAAGGTATCGGCCAGACCT 288584 Query 106292 TGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC---AACG 106348 || ||||| | ||||||||||| ||| |||||||| || || || ||| ||| Sbjct 288583 TGGACACCAAGACCAATAGGTCGGTGACGCATATTGCTGTTACGTGC---CTCAATAACA 288527 Query 106349 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 106408 || ||| ||| ||| ||||| ||| ||||| | ||||| | || | ||| Sbjct 288526 GGGTAATGGTTTGCGTCGATGACCTTGTTCAGATTGCGGACAACAACTTGAGTAACCTCA 288467 Query 106409 TGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATT 106468 || || |||| | | | | | || | | || || | ||| ||||| || Sbjct 288466 TGTAGCTTTTGGAAGTTATAGCTCTCTGTGTGATAATCCACGAATGATGGCAGGGCCATA 288407 Query 106469 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAC 106528 ||||| | ||||||||||| ||||| ||| ||||| | || || || || Sbjct 288406 GATGCTAGGTTGCAAACAGCAACTTCATCTGGGGCTGAATACTCGATGATCTCGGTGCAG 288347 Query 106529 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTT-GCACGCATC 106587 | ||||| || || || || |||||||| ||||| ||||| || ||| | ||| Sbjct 288346 AGATTGGAGCTGCGGATTGTGCCTAAATTCTTCTGGTTGCTCTTGCGATTGGCATG-ATC 288288 Query 106588 CTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA- 106646 ||||||||||||| |||| | || || || ||||| | | ||| || || | ||| | Sbjct 288287 CTTGTAGAGCATGAAGGGGTTGCCGGTTTCTGTCTGAGCTTCGAGGATGGCATACCAGAG 288228 Query 106647 CATCGGCGGC-TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGG 106705 | || | | | | | ||||| | | || ||||| ||||| ||| || |||||| Sbjct 288227 CTTCTGAGCCTTTATCTTCTGGCG--GCCGCGACCCTCAGCCTCATACGTTTCGTAGAGA 288170 Query 106706 GCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 106765 || |||||||| ||||| | || | || || || || | || || | || Sbjct 288169 GCCTCAAACTCATCACCGTAGACATCAGCAAGGCCGGGGCACTCATTCGGGCACATCAGC 288110 Query 106766 GACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAA 106825 | ||| | || || || || ||||||||||| || || || ||||| |||| | Sbjct 288109 GTCCACTCGCCGTTCTTTTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGGGCCAAG 288050 Query 106826 AAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCC 106885 ||||| || | | ||| | || || | || || || ||| | || |||||||| Sbjct 288049 AAGAGGTCACGAGCGCGAACTTCCTCCTTCCCATGATTCTTTCGCAGATCTAGGAACTCA 287990 Query 106886 ATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGATCCCTTTCGACGC 106939 | | ||||| ||||||||| |||||||||| |||| || | ||| | Sbjct 287989 AACACATCCGAGTGCCATGGTTCAAGATAGATGGCGAAGGCGCCAGGCCGCTTGTTA--- 287933 Query 106940 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 106999 ||| |||||| || || || || ||| || || || || ||||| |||| |||||| Sbjct 287932 CCACCTTGATCGACGTAACGAGCCGTGTTATTGAAGACACGCAGCATGGGAACAATACCG 287873 Query 107000 TCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGC 107059 | ||| ||| || || || || ||| |||| | | || | | Sbjct 287872 TTAGATGTACCGTTAGTTCCAGCGATGTAAGAGCCCGTGGCACGGATGCGGTGAACATTG 287813 Query 107060 ATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATA 107119 | ||||| || |||||| |||||| || ||||| | | | || |||| || Sbjct 287812 AGGCCAATGCCTCCAGCCATCTTTGAAATCATAGCACATGTCTTCAAGGTATCATAAATT 287753 Query 107120 CCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGT 107179 || | ||| || ||||| || ||| | ||| ||| |||||||| ||| ||| Sbjct 287752 CCCTCGATGCTATCGTCCTTCATGTCGACTAAGAAACAAGACGACATCTGGGGTTGCGGT 287693 Query 107180 GTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCG 107239 || || ||||||||||| || || | || || |||| | ||||||| || | Sbjct 287692 GTTCCGGCATTGAAGAGTGTCGGAGAAGCATGGGTGAAGAATTTAAGGGACATGAGGTTG 287633 Query 107240 TATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAAC 107299 || ||||| | ||| || ||||| || || |||||||| ||||| ||||| | | Sbjct 287632 TAGGTCTCGAGGACCCTCTCGATGTCGTCTCCCCAGATGCCGACCGCCACGCGCATGATC 287573 Query 107300 ATGTATTGGGGT 107311 |||| || ||| Sbjct 287572 ATGTGCTGAGGT 287561 >seq37 Length=418716 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/211 (71%), Gaps = 8/211 (4%) Strand=Plus/Minus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || || |||||||| || ||||| || || || || ||||| ||||| Sbjct 51560 GGCAAAGTCGGTATGAAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAAGTCAGGCC 51501 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 ||||| ||||| |||||||| | ||| | |||| ||| | || ||||||||| Sbjct 51500 AGGCATCAGACCACGCTTCTTGAGCCAGAAGATAGATGCGAAAGCACCACTGAAGAAGAT 51441 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTG-TC-- 117449 |||||||||| ||||| |||| | ||||| ||| |||| | ||| ||| | || Sbjct 51440 ACCCTCCACAGCGGCAAAGGCAATCAAGCGCTGGGCAAAGGTG-GAG---TTGCGATCGC 51385 Query 117450 -AAACCATTTCATTGCCCATTTCGCCTTCTT 117479 || ||| |||| ||||| | |||||||| Sbjct 51384 TAATCCACTTCAGGGCCCAGTCAGCCTTCTT 51354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979037432360