Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq25 120 2e-22 >seq25 Length=549874 Score = 120 bits (132), Expect = 2e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| |||||||| || || || || ||||||||| || |||| | | || || | || Sbjct 482466 ATGGAGGGTAGACTCCTTCTGGATGTTGTAATCGCTGAGGGTTCGGCCGTCCTCGAGCTG 482525 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || || || |||| |||||| || ||||| ||||||||||| ||||| || || || Sbjct 482526 CTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGAATGCCTTCCTTATCCTGGATCTT 482585 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||||| | || | ||||| || | ||||| || | |||| ||| || ||||| Sbjct 482586 CGACTTTACGTTGTCGATTGTGTCGGAAGACTCCACCTCCAAGGTGATCGTCTTACCGGT 482645 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | ||| || ||||| |||||||| Sbjct 482646 GAGAGTCTTGACAAAGATCTGCAT 482669 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| ||||| || || || ||||| ||| | |||| | | || || | ||| Sbjct 482174 TGGAGGGTGGATTCCTTCTGAATGTTGTAGTCGCTCAGGGTTCGGCCGTCCTCGAGCTGC 482233 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| |||| ||||| || ||||| ||||||||||||||||| || || || Sbjct 482234 TTGCCAGCAAAAATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCTTTATCCTGGATCTTC 482293 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||||| | || | ||||| || | || || || || || | ||| || || || Sbjct 482294 GACTTTACGTTGTCGATCGTGTCGGATGACTCAACCTCGAGCGTAATCGTCTTTCCCGTC 482353 Query 101447 AAAGTTTTTAC 101457 || ||||| || Sbjct 482354 AAGGTTTTGAC 482364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396277245715323