Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq13 210 4e-49 seq37 154 3e-32 >seq13 Length=863668 Score = 210 bits (232), Expect = 4e-49 Identities = 1001/1568 (64%), Gaps = 57/1568 (4%) Strand=Plus/Minus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 || ||||| | |||||| || |||| | || | | ||||| |||||||||||| Sbjct 288982 GGATTGACGACCTGGAACTCGCCTGCCAAGACGCGACGAGAGTAAATGTTTGAAGTGTAA 288923 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 || || | || ||||||||| |||| ||||| | ||||| || || ||||| |||||| Sbjct 288922 GGTTCAAAGCACTCGTTGTTACCCAAGATCTGCGAGGTGCTAGCAGTTGGCATAGGAGCC 288863 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCC 213086 | || ||||| || | || || |||| ||| | || | ||||||||| Sbjct 288862 ATGAGAAGACTATTGCGTACACCATGCTGCTTGATCTGCTCTTTGAGAGCAGCCCAGTCC 288803 Query 213087 CATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146 || |||| || | || | |||||| || |||| | |||||||| | Sbjct 288802 CAAAGATCAGAGGGGG---------TAACATCCCACATATCGTACTGGAGGATGCCTTGG 288752 Query 213147 CTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGAC 213206 || || |||| ||||| || || | || | | | || || | ||| || Sbjct 288751 GAAACAGGTGAACCCTCGTAAGTAGAATAAGTACCCTCCACTTTAGCAATCTCCATTGAT 288692 Query 213207 GCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCT 213266 || || ||||||| ||| || || || || |||| | ||||||||| | |||||| Sbjct 288691 GCAGTCAAAGCAGCGTGGTACATAGTCTCGAAGATCTGCTTGTTGAGCTGCCGAGCCTCT 288632 Query 213267 GGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATG 213326 || || || ||||| | | |||| ||| ||||| || ||||| || | Sbjct 288631 GGTGATTCAAAAGGCATGCGGAGGGCGAGGAAGGTATCGGCCAGACCTTGGACACCAAGA 288572 Query 213327 CCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCA 213385 || || |||| ||| | || || || | || ||| | |||||| ||| Sbjct 288571 CCAATAGGTCGGTGACGCATATTGCTGTTACGTGC-CTCAATAACAGGGTAATGGTTTGC 288513 Query 213386 GTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTA-CTCGT 213444 |||||||| |||||| || |||||| | |||| || || | || ||| || | Sbjct 288512 GTCGATGACCTTGTTCAGATTGCGGACAACAACTTGAGTAACCT----CATGTAGCTTTT 288457 Query 213445 GATTGAACACGTAGCCCCCGTCCTG------CACAAACTCAGGCAGGGCGATGCTGGCCA 213498 | ||| |||| | | || ||| || |||||||| || || | Sbjct 288456 G---GAAGTTATAGCTCTCTGTGTGATAATCCACGAATGATGGCAGGGCCATAGATGCTA 288400 Query 213499 GGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGC 213558 |||||||||| || || || | | | ||| ||||| |||||||||||||| || ||| Sbjct 288399 GGTTGCAAACAGCAACTTCATCTGGGGCTGAATACTCGATGATCTCGGTGCAGAGATTGG 288340 Query 213559 TGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCG-TTGGCAGAATCCTTGTAG 213617 || ||||| ||||| | |||| ||||| ||| ||| |||||| |||||||||| Sbjct 288339 AGCTGCGGATTGTGCCTAAATTCTTCTGGTTGCTCTT-GCGATTGGCATGATCCTTGTAG 288281 Query 213618 AGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACC 213675 |||||| ||||| ||||| ||| ||| | | || | |||| |||||| | | Sbjct 288280 AGCATGAAGGGGTTGCCGGTTTCTGTCTGAGCTTCGAGGA--TGGCATACCAGAGCTTCT 288223 Query 213676 TGGCCTTGACCACCCGCCTGACAGCTCCGGGCGT-AGCCTCGTACTGTTCGTAGAGCTCG 213734 ||||| | | ||| | || || | | |||||| ||| ||||||||| | Sbjct 288222 GAGCCTTTA----TCTTCTGGCGGCCGCGACCCTCAGCCTCATACGTTTCGTAGAGAGCC 288167 Query 213735 TTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACA-GGATGCGGGACACATGAGGCT 213793 | || || | || |||| | || || || || || |||| ||||| || | Sbjct 288166 TCAAACTCATCACCGTAGACATCAGCAAGGCCGGGGCACTCATTCGGG-CACATCAGCGT 288108 Query 213794 CCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAA 213853 ||| || |||| | | ||| | || |||||| || || |||| ||| || || ||| Sbjct 288107 CCACTCGCCGTTCTTTTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGGGCCAAGAA 288048 Query 213854 CAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAA 213913 ||||| | | | || ||| ||| || || ||||||||||| || ||||| Sbjct 288047 GAGGTCACGAGCGCGAACTTCCTCCTTCCCATGATTCTTTCGCAGATCTAGGAACTCAAA 287988 Query 213914 GATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCC 213970 | |||| |||||| || || | |||||||| |||||||| |||| |||| || || Sbjct 287987 CACATCCGAGTGCCATGGTTCAAGATAGATGGCGAAGGCGCCAGGCCGCTTGTTACCACC 287928 Query 213971 CTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGA 214030 || || || | ||| | ||||||| ||||| | ||| || | ||||| || Sbjct 287927 TTGATCGACGTAACGAGCCGTGTTATTGAAGACACGCAGCATGGGAACAATACCGTTAGA 287868 Query 214031 CTGT-CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCA--GGTTGCTCATGGAGAG 214087 ||| ||||| ||||| || || || ||||| | ||| | | | || ||| ||| Sbjct 287867 -TGTACCGTTAGTTCCAGCGATGTAAGAGCCCGTGGCACGGATGCGGTGAACAT--TGAG 287811 Query 214088 CCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCC 214147 || ||||| || || ||| || ||||| || || | ||| || || || || Sbjct 287810 GCCAATGCCTCCAGCCATCTTTGAAATCATAGCACATGTCTTCAAGGTATCATAAATTCC 287751 Query 214148 GGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGA 214207 | ||||| || || | | || | ||||| || ||| | |||||| | | Sbjct 287750 CTCGATGCTATCGTCCTTCATGTCGACTAAGAAACAAGACGACATCTGGGGTTGCGGTGT 287691 Query 214208 GCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTA 214267 || | ||||| || || || |||||| | | || || || | ||| |||| Sbjct 287690 TCCGGCATTGAAGAGTGTCGGAGAAGCATGGGTGAAGAATTTAAGGGACATGAGGTTGTA 287631 Query 214268 GGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCG-CAC-CTCATCAGC 214325 |||||| ||||| |||||||| | | || || || ||| | ||| | | Sbjct 287630 GGTCTCGAGGACCCTCTCGATGTCGT--CTCCCCAGATGCCGACCGCCACGCGCATGATC 287573 Query 214326 ATGTGCTGGGGCCTCT---CTATGGGTCCTTTGGGGCCCTTGAGCAGGTAGGAGCGCTCC 214382 |||||||| || |||| | || || || | ||||| |||||||| |||||| Sbjct 287572 ATGTGCTGAGGTCTCTCAACAATCTTGCCGTT---GATTTTGAGAAGGTAGGACCGCTCC 287516 Query 214383 AGAGTCTTGAACCCAAAGTAGGAGTAGGTATGATCGTTCCCGTGTATGAGGGCAGCGTCC 214442 | |||||||| ||||| || |||| | |||| ||| || | ||||| ||| Sbjct 287515 AACGTCTTGAAGCCAAAATATTGGTAGTTGAAATCGCGGTCGTATACAATGGCAGAGTCA 287456 Query 214443 AGCTCTTC 214450 | |||||| Sbjct 287455 AACTCTTC 287448 >seq37 Length=418716 Score = 154 bits (170), Expect = 3e-32 Identities = 300/437 (69%), Gaps = 7/437 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | |||||||||||||| ||||| || | | |||||||||||| Sbjct 51851 CTGGTAATCACCGACGCGCTTCTCAAAGAAGTTGGTCTTGCCACCGAGCGAGATGTTCTC 51792 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGG-CCCATCTGTTCCAGCA 47957 ||||||| ||| ||||||| | | || ||| | ||| |||| | |||| Sbjct 51791 CATGAAGTCGAACGGGTTGGAAGAGCGGTAGACCT-TCTCATTACCCAGAGCGACGAGCA 51733 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | | || || || |||||||||||| ||| ||| || ||||||||| | || | Sbjct 51732 GACGGTCAGCAACAAACTCGATGTATTGCTTCATCAGGTTGGCGTTCATGCCGAGCAGAG 51673 Query 48018 A-CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||||| || |||| ||| || ||||| | ||| |||| ||||| || | | | | Sbjct 51672 CGCACGG-CAGCGCCTCTGTCAGGAACTCTTGCTCAATCTTGACGGCATCGACGATGACC 51614 Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCA 48136 || ||| || |||| ||| |||||| | | |||| ||||||| Sbjct 51613 GCCTCCACGACCTCCTTACTGGGTCGGTTCTTCAGGTGAGAGA---ACAGCAGGCAGGCA 51557 Query 48137 AAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGC 48196 ||||| | || | || ||||| ||| ||||||| |||||||||| || |||||| Sbjct 51556 AAGTCGGTATGAAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAAGTCAGGCCAGGC 51497 Query 48197 ATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCC 48256 || | || | || ||||||||||| || | ||||||| ||| ||||||||| ||| Sbjct 51496 ATCAGACCACGCTTCTTGAGCCAGAAGATAGATGCGAAAGCACCACTGAAGAAGATACCC 51437 Query 48257 TCCACTGCCGCGAACGC 48273 ||||| || || || || Sbjct 51436 TCCACAGCGGCAAAGGC 51420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931530017045760