Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq13 250 3e-61 seq37 95.1 1e-14 >seq13 Length=863668 Score = 250 bits (276), Expect = 3e-61 Identities = 1132/1778 (64%), Gaps = 51/1778 (3%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||||| || || |||||||| || || ||||| || ||| Sbjct 287562 CCTCAGCACATGATCATGCGCGTGGCGGTCGGCATCTGGGGAGACGACATCGAGAGGGTC 287621 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 75331 | ||||| ||| || ||||||| | |||| || || | || || |||||| Sbjct 287622 CTCGAGACCTACAACCTCATGTCCCTTAAATTCTTCACCCATGCTTCTCCGACACTCTTC 287681 Query 75332 AATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 75391 ||||| || ||||| ||| |||||||| ||| ||| | ||| || ||||| || Sbjct 287682 AATGCCGGAACACCGCAACCCCAGATGTCGTCTTGTTTCTTAGTCGACATGAAGGACGAT 287741 Query 75392 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 75451 ||| | || || |||| || | | | ||||| || |||||| |||||| Sbjct 287742 AGCATCGAGGGAATTTATGATACCTTGAAGACATGTGCTATGATTTCAAAGATGGCTGGA 287801 Query 75452 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 75511 || ||||| | | | || | | |||| ||| || || || || Sbjct 287802 GGCATTGGCCTCAATGTTCACCGCATCCGTGCCACGGGCTCTTACATCGCTGGAACTAAC 287861 Query 75512 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 75571 ||| ||| | |||||| |||| ||||| || || || || ||| || || || || Sbjct 287862 GGTACATCTAACGGTATTGTTCCCATGCTGCGTGTCTTCAATAACACGGCTCGTTACGTC 287921 Query 75572 AATCAAGCGGGGCGTCGCAAGGGGTC------CATCGCGGTCTACTTGGAACCATGGCAT 75625 |||||| || | |||| || | | |||| |||| | ||||||||||| Sbjct 287922 GATCAAGGTGG---TAACAAGCGGCCTGGCGCCTTCGCCATCTATCTTGAACCATGGCAC 287978 Query 75626 GCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGT 75685 | ||| | | |||||||| || | ||| || || || | || || | ||| | Sbjct 287979 TCGGATGTGTTTGAGTTCCTAGATCTGCGAAAGAATCATGGGAAGGAGGAAGTTCGCGCT 288038 Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGT 75745 | || ||||| | |||| ||||| || || || ||||||||||| || || || Sbjct 288039 CGTGACCTCTTCTTGGCCCTTTGGATCCCTGATCTCTTCATGAAGCGTGTCGAAAAGAAC 288098 Query 75746 GGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAG 75805 || | ||| | || | || || | || || || || | || | ||||| Sbjct 288099 GGCGAGTGGACGCTGATGTGCCCGAATGAGTGCCCCGGCCTTGCTGATGTCTACGGTGAT 288158 Query 75806 GAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCA 75865 |||||||| || |||||| || |||||| | |||||| | | | || || | Sbjct 288159 GAGTTTGAGGCTCTCTACGAAACGTATGAGGCTGAGGGTCGCGGCCGCCAGAAGATAA-A 288217 Query 75866 GCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATAT 75924 | | | || | | ||| | || || ||| || | ||||| || || || | || | || Sbjct 288218 GGCTCAGAAGCTCTGGTATGCCATCCTCGAAGCTCAGACAGAAACCGGCAACCCCTTCAT 288277 Query 75925 GCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAG 75984 ||| ||||||||| | || ||||| ||||| |||||||| || |||||| || Sbjct 288278 GCTCTACAAGGATCATGCCAATCGCAAGAGCAACCAGAAGAATTTAGGCACAATCCGCAG 288337 Query 75985 CTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAA 76044 ||| ||||| ||||| || || | ||||| ||| ||||| ||||||||||| Sbjct 288338 CTCCAATCTCTGCACCGAGATCATCGAGTATTCAGCCCCAGATGAAGTTGCTGTTTGCAA 288397 Query 76045 TTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGA 76104 | ||||| || ||||| ||| | || || | | || | | | | | | Sbjct 288398 CCTAGCATCTATGGCCCTGCCATCATTCGTGGATTATCACACAGAGAGCTATAACTTCCA 288457 Query 76105 AAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAA 76164 ||| || ||||| | || | ||||| | ||||| ||| ||||| ||| ||| Sbjct 288458 AAAGCTACATGAGGTTACTCAAGTTGTTGTCCGCAATCTGAACAAGGTCATCGACGCAAA 288517 Query 76165 TTTTTATCCCGTT---GAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTT 76221 ||| || ||| ||| || || || |||||||| ||| ||||||||||| | Sbjct 288518 CCATTACCCTGTTATTGAG---GCACGTAACAGCAATATGCGTCACCGACCTATTGGTCT 288574 Query 76222 GGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGA 76281 ||||| |||||||| || ||| || | |||| | ||||| ||| || Sbjct 288575 TGGTGTCCAAGGTCTGGCCGATACCTTCCTCGCCCTCCGCATGCCTTTTGAATCACCAGA 288634 Query 76282 AGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCG-- 76339 || | || | || | ||||| || || ||||| ||||| | || || Sbjct 288635 GGCTCGGCAGCTCAACAAGCAGATCTTCGAGACTATGTACCACGCTGCTTTGACTGCATC 288694 Query 76340 AGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCC 76399 | | | || | ||| ||| | ||| | ||| || | |||||||| || | ||| Sbjct 288695 AATGGAGATT--GCTAAAGTGGAGGGTACTTATTCTACTTACGAGGGTTCACCTGTTTCC 288752 Query 76400 CAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACG--ACTGGG 76457 ||||| | || |||| ||||||||||| | | | || || | || | |||||| Sbjct 288753 CAAGGCATCCTCCAGTACGATATGTGGGATGTT--ACCCCCTCTGATCTTTGGGACTGGG 288810 Query 76458 ATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAA 76517 || |||||| || | |||||| || | ||| | || || |||||| | ||||| || | Sbjct 288811 CTGCTCTCAAAGAGCAGATCAAGCAGCATGGTGTACGCAATAGTCTTCTCATGGCTCCTA 288870 Query 76518 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAA 76577 ||||||| || |||| | || ||||||||||| || || ||||||||||| ||||| Sbjct 288871 TGCCAACTGCTAGCACCTCGCAGATCTTGGGTAACAACGAGTGCTTTGAACCTTACACTT 288930 Query 76578 CAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCAC---C 76634 ||||||| ||| | | | | ||||| |||| || ||| ||| | | | Sbjct 288931 CAAACATTTACTCTCGTCGCGTCTTGGCAGGCGAGT---TCCAGGTCGTCAATCCCTGGC 288987 Query 76635 TCGTCAATGACCTCAAGAAGATT--GGTCTCTGGTCCAAGGATATGAAGGATC----TCA 76688 | |||| || || || |||| || || ||||| | |||||||| ||| | Sbjct 288988 TACTCAAGGA--TCTAGTGGATTTGGGACTGTGGTCTGACAATATGAAGAATCGTATTAT 289045 Query 76689 TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATC 76748 || |||| | |||||||| || ||||| | ||| || ||| ||||| | Sbjct 289046 TGCCGAAAAC----GGTTCCATCCAGAATATTCCTAGTATACCCACTGAGGTCAAGGCAC 289101 Query 76749 TCTACCGCACAGTGTGGGAAAT---CAAGATGAAAGATGTCATTGACATGGCCGCAGATC 76805 | ||| || || ||||| || | || | || |||| | ||||| || |||| Sbjct 289102 TATACAAAACCGTCTGGGAGATTTCCCAGCGCACAGTTGTC---CAAATGGCTGCTGATC 289158 Query 76806 GTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATG-GAAAGTCCAACGATG 76864 ||||| || |||||||| ||| | | ||| | |||| || || || || ||| Sbjct 289159 GTGGTGCATTTATTGATCAGTCTCAGTCTCTCAATATCCACATGAGAGAG-CCTACCATG 289217 Query 76865 TCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTAC 76924 ||| || | ||||| | | |||||||| || || || ||||| |||||| Sbjct 289218 GGCAAAATCACAAGCATGCACTTCGCTGGGTGGAAACTCGGTCTGAAGACCGGCATGTAC 289277 Query 76925 TATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTT 76962 || |||||| || |||| || | ||| ||||| || Sbjct 289278 TACCTCCGAACACAGGCCGCTGCTCAACCTATTCAATT 289315 >seq37 Length=418716 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/211 (71%), Gaps = 8/211 (4%) Strand=Plus/Plus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTT---GA-CACAAAGTCTCGCTCCTTCGCCGA 65078 |||||||| | ||||| |||| ||| || || | ||| ||| | |||| ||| | Sbjct 51354 AAGAAGGCTGACTGGGCCCTGAAGTGGATTAGCGATCGCAA---CTC-CACCTTTGCCCA 51409 Query 65079 GCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTAT 65138 |||| | |||| ||||| ||||||||||||||||||| || | ||| |||| Sbjct 51410 GCGCTTGATTGCCTTTGCCGCTGTGGAGGGTATCTTCTTCAGTGGTGCTTTCGCATCTAT 51469 Query 65139 TTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTC 65198 | ||| | |||||||| ||||| ||||| ||||| ||||| || || || || || Sbjct 51470 CTTCTGGCTCAAGAAGCGTGGTCTGATGCCTGGCCTGACTTTCTCCAACGAGCTCATCTC 51529 Query 65199 CCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229 ||| || |||||||| || || |||||| Sbjct 51530 CCGTGACGAGGGTCTTCATACCGACTTTGCC 51560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596567817748320