Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq13 111 5e-19 seq14 98.7 3e-15 seq10 91.5 4e-13 >seq13 Length=863668 Score = 111 bits (122), Expect = 5e-19 Identities = 453/705 (64%), Gaps = 17/705 (2%) Strand=Plus/Minus Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699 ||||| ||| || || || || ||| |||||||||||||||||||| || | Sbjct 288358 ATCTCGGTGCAGAGATTGGAGCTGCGGATTGTGCCTAAATTCTTCTGGTTGCTCTTGCGA 288299 Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 || | ||||||||| || ||| | ||| | || || || |||| || || || || Sbjct 288298 TTGGCATGATCCTTGTAGAGCATGAAGGGGTTGCCGGTTTCTGTCTGAGCTTCGAGGATG 288239 Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATA--TT 155817 |||||| | | || || || | || | | | || || | |||||| || Sbjct 288238 GCATACCAGAGCTTCTGAGCCTTTATCTTCTGGCGGCCGCGACCCTCAGCCTCATACGTT 288179 Query 155818 TCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGG 155877 || || | ||| | | || |||||||| |||| || || ||||||| || | Sbjct 288178 TCGTAGAGAGCCTCAA--ACTCATCACCGTAGACATCAGCAAGGCCGGGGCACTCATTCG 288121 Query 155878 GGCAAAACAGCGACCAAATT---TTATTACCGATTACACGCTCCATAAATACATCACTCG 155934 |||| | ||||| ||| || || ||| |||||| ||| || | |||| Sbjct 288120 GGCACATCAGCGTCCACTCGCCGTTCTTTTCGA---CACGCTTCATGAAGAGATCAGGGA 288064 Query 155935 CCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTA 155994 ||||| || |||| ||||| | || ||||| | || |||||||| || | Sbjct 288063 TCCAAAGGGCCAAGAAGAGGTCACGAGCGCGAACTTCCTCCTTCCCATGATTCTTTCGCA 288004 Query 155995 GCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCAT 156054 | |||| ||| || | ||| | || ||| || ||||| || || || ||| Sbjct 288003 GATCTAGGAACTCAAACACATCCGAGTGCCATGGTTCAAGATAGATGGCGAAGGCGCCAG 287944 Query 156055 TCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAG 156111 || |||| ||||| ||||| || || ||||| || ||||||||||||| ||||| | Sbjct 287943 GCCGCTTGTTACCACCTTGATCGACGTAACGAGCCGTGTTATTGAAGACACGCAGCATGG 287884 Query 156112 GAATAATACCATTGGAAGTGCCATTGGTTCC-GCGAATATGCGAACCAGATGAGCGAACA 156170 ||| |||||| || || || || || ||||| ||| || | || || | | || | Sbjct 287883 GAACAATACCGTTAGATGTACCGTTAGTTCCAGCG-ATGTAAGAGCCCGTGGCACGGATG 287825 Query 156171 TTATGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCATTCCTTTAC 156229 |||| || || ||||| || || | |||| || ||||| ||| ||| ||| | Sbjct 287824 CGGTGAACATTGAGGCCAATGCCTCCAG-CCATCTTTGAAATCATAGCACATGTCTTCAA 287766 Query 156230 AGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAA 156289 |||| |||| || || || ||| || | ||| | || | || || | Sbjct 287765 GGTATCATAAATTCCCTCGATGCTATCGTCCTTCATGTCGACTAAGAAACAAGACGACAT 287706 Query 156290 TTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATG 156334 || ||| | |||||||| || ||||| ||||| || | ||||| Sbjct 287705 CTGGGGTTGCGGTGTTCCGGCATTGAAGAGTGTCGGAGAAGCATG 287661 >seq14 Length=817888 Score = 98.7 bits (108), Expect = 3e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 251431 TGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGATGCACCG 251490 ||||| | | |||| || || | ||| |||| || |||| ||| | |||||| Sbjct 138604 TGGACTCGGAAAGCGTCCGACACCTCAAATAGTCGTTCCTTCAAGAAAGCCGCAGCACCG 138663 Query 251491 TGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCTA 251550 || | ||||||||| ||||| |||||||| ||||||||||| ||||| |||||||| | Sbjct 138664 TGAGCAATCATACAGTCACGTTCCATTTCTCCGAAACGAAGGCCACCGTCGCGAGCACGT 138723 Query 251551 CCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTGCTTA 251610 || ||| | ||||| || || | | || || ||| || || ||| |||| Sbjct 138724 CCTTCGACGGGCTGCCGGGTCATGATCTGCACCGGGCCGCGGGCACGAGCATGGATCTTA 138783 Query 251611 TCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 || | |||||||| || ||||||||| ||| || || | ||||| Sbjct 138784 TCGTCCACCATATGTCGAAGGCGCTGGTAGTATGTAGGCCCAAAGAAGA 138832 >seq10 Length=958652 Score = 91.5 bits (100), Expect = 4e-13 Identities = 156/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 302584 TTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGA 302643 |||| || ||| || ||||||||||| ||| || ||||| || || ||||| || ||| Sbjct 512996 TTGACTAGACGTCGTTGAATATAACCTGTTTCAGCAGTTTTCACGGCCGTATCGATAAGA 512937 Query 302644 CCAACACGACCACCCATAGCATGGAAGAATAGCTCT--TCCGGTCGTAGCCCCCCAATAA 302701 || |||| || ||||||| || ||| | | ||| |||| |||| | | | Sbjct 512936 CCCTCACGGCCTGCCATAGCGTGAAAGTAGAATTCTGAAGGGGTC-AAGCCTCTC-AGGT 512879 Query 302702 AGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCA 302761 | || ||||||| || |||||||| || || || | ||| ||| || ||||| |||| Sbjct 512878 ATGAATTCTCAACAAACCCACGCGCTTCTGGGGAGTAGTCATCCTTTGTGAAGTGAGGCA 512819 Query 302762 GGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAAC 302804 ||||| || | ||||| | ||||| || || || ||||| Sbjct 512818 AGGTCCGGTATTTGAAGCCGAAGGGGATGCGTTTACCCTCAAC 512776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471813093018543