Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01]
239 sequences; 44,257,831 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq13 185 8e-42
seq92 113 4e-20
seq25 111 1e-19
seq1 96.9 3e-15
>seq13
Length=863668
Score = 185 bits (204), Expect = 8e-42
Identities = 975/1529 (64%), Gaps = 62/1529 (4%)
Strand=Plus/Minus
Query 138507 GACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAA 138566
|||||| || || || ||||| || |||||| ||||||||| ||| |||| |||||
Sbjct 288974 GACCTGGAACTCGCCTGCCAAGACGCGACGAGAGTAAATGTTTGAAGTGTAAGGTTCAAA 288915
Query 138567 CGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAG 138626
| |||||||| |||| ||||| | ||| | || || ||||| |||| | |||
Sbjct 288914 GCACTCGTTGTTACCCAAGATCTGCGAGGTGCTAGCAGTTGGCATAGGAGCCATGAGAAG 288855
Query 138627 AGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATC 138686
| ||| |||| ||| || ||||||| | || ||||| | | ||||||||| | |||
Sbjct 288854 ACTATTGCGTACACCATGCTGCTTGATCTGCTCTTTGAGAGCAGCCCAGTCCCAAAGATC 288795
Query 138687 GCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTG----- 138741
|| | | ||||||||||||||| | || || ||| | || |
Sbjct 288794 AGAGGGGGTAACATCCCACATATCGTACTGGAGGATGCC-----TTGGGAAACAGGTGAA 288740
Query 138742 CCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCG-TTGCTCGCCTCGAGCGC 138800
|| ||||| | | || ||| | ||| || | ||| ||| | || | ||
Sbjct 288739 CCCTCGTAAGTAGAATAAGTACCCTCCACTTTAGCAATCTCCATTGATGCAGTCAAA-GC 288681
Query 138801 ACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTC-GGCGCTCTCGT 138859
| | | ||| ||||| ||| ||||||| |||||| || ||||| || | | ||
Sbjct 288680 AGCGTGGTACATAGTCTCGAAGATCTGCTTGTTGAGCTGCCGAGCCTCTGGTGAT-TCAA 288622
Query 138860 ACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGC 138919
| ||||||||||| ||| | |||||||| ||||| || || | || | ||| |
Sbjct 288621 AAGGCATGCGGAGGGCGAGGAAGGTATCGGCCAGACCTTGGACACCAAGACCAATAGGTC 288562
Query 138920 GATGGCGCAGATTTGACGCTTTTGCG-GCTTCGATA---GGATAATAGTTTACATCGATG 138975
| || |||| ||| ||| || || || || ||| || |||| |||| | ||||||
Sbjct 288561 GGTGACGCATATT----GCTGTTACGTGCCTCAATAACAGGGTAATGGTTTGCGTCGATG 288506
Query 138976 ATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTAT 139035
| ||||| | ||| || || || || | ||| | | || || || | ||
Sbjct 288505 ACCTTGTTCAGATTGCGGACAACAACTTGAGTAACCTCATGTAGCTTTTGGAAGTTATA- 288447
Query 139036 GTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAA--ATCGAGGCTATGT 139093
|| | | ||| || | || || ||| | || || || || |||| ||
Sbjct 288446 --GCTCTCTGTGT----GATAA--TCCACGAAT--GATGGCAGGGCCATAGATGCTAGGT 288397
Query 139094 TGCACACCGCCACTTCGTCGGGGTCGCTGTAT--TCGACAATTTCGGCACACAAATTACT 139151
|||| || || ||||| || ||| |||| || |||| || |||| || | |||
Sbjct 288396 TGCAAACAGCAACTTCATCTGGG--GCTGAATACTCGATGATCTCGGTGCAGAGATTGGA 288339
Query 139152 ACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAG 139211
| ||| || |||||||| | || ||||| || || || | ||| ||||| ||
Sbjct 288338 GCTGCGGATTGTGCCTAAATTCTTCTGGTTGCTCTTGCGATTGGCATGATCCTTGTAGAG 288279
Query 139212 CATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGC 139271
||| | || |||| ||||| || | || | ||| | | | | | |||
Sbjct 288278 CATGAAGGGGTTGCCGGTTTCTGTCTGAGCTTCGAGGATGGCATACCAGAGCTTCTGAGC 288219
Query 139272 TTGTATTT---GACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAA 139328
| ||| | | || || | || | ||| ||| |||||||||| | || ||
Sbjct 288218 CTTTATCTTCTGGCGGCCGCGACCCTCAGC---CTCATACGTTTCGTAGAGAGCCTCAAA 288162
Query 139329 TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATAC 139388
||||||||| | |||| ||| || | |||| | || ||||| |||| ||| |
Sbjct 288161 CTCATCACCGTAGACATCAGCAAGGCCGGGGCACTCATTCGGGCACATCAGCGTCCACTC 288102
Query 139389 GCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATC 139448
||||||| | ||| ||| ||||||| ||||| || ||||| | || || | | ||
Sbjct 288101 GCCGTTCTTTTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGGGCCAAGAAGAGGTC 288042
Query 139449 GCG--CGCCTTCTTATCTTCCGAACCCATGTTACGTTT-CATGTTAAGGAAATCAAAAAC 139505
|| ||| ||| | ||| |||||| | | || || | ||||| ||||| ||
Sbjct 288041 ACGAGCGCGAACTT--CCTCCTT-CCCATGATTCTTTCGCAGATCTAGGAACTCAAACAC 287985
Query 139506 GTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTG 139562
|| | |||||||||||| ||||||||||| | ||||| ||| ||| ||||||||
Sbjct 287984 ATCCGAGTGCCATGGTTCAAGATAGATGGCGAAGGCGCCAGGCCGCTTGTTACCACCTTG 287925
Query 139563 ATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGT 139622
|||||||| || | | |||||||| || |||| ||| || | | |||| | | |||
Sbjct 287924 ATCGACGTAACGAGCCGTGTTATTGAAGACACGCAGCATGGGAACAATACCGTTAGATGT 287865
Query 139623 TCCGTTGGTGCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGAT 139682
||||| || | | |||| | | || |||| | || ||||||| ||| ||
Sbjct 287864 ACCGTTAGTTCCAGCGATGTAAGAGCCCGTGGCACGGATGCGGTGAACATTGAGGCCAAT 287805
Query 139683 TCCGCC-GCCAAATTTGGATATTAAAACGCAATCGCGT-AATGTCTCGTATATACCTCTT 139740
|| || |||| ||| || || | | | | || | | || || || || || ||
Sbjct 287804 GCCTCCAGCCATCTTT-GAAATCATAGCAC-ATGTCTTCAAGGTATCATAAATTCCCTCG 287747
Query 139741 ATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCG 139800
||||| ||||||| ||| ||| | || || ||||| | || ||| | || |||
Sbjct 287746 ATGCTATCGTCCTTCATGTCGACTAAGAAACAAGACGACATCTGGGGTTGCGGTGTTCCG 287687
Query 139801 GCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTT 139860
|| || || || ||| || || ||||| | || ||||| | | ||| ||
Sbjct 287686 GCATTGAAGAGTGTCGGAGAAGCATGGGTGAAGAATTTAAGGGACATGAGGTTGTAGGTC 287627
Query 139861 TCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGT 139920
|||| | | ||| | || || ||| ||| ||||| | || ||||| | ||| ||
Sbjct 287626 TCGAGGACCCTCTCGATGTCGTCTCCCCAGATGCCGACCGCCACGCGCATGATCATGTGC 287567
Query 139921 TGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATA--ACCGTTCTCTAGGGTCT 139978
|| | || | | | ||| | |||||| || || |||| ||| | ||||
Sbjct 287566 TGAGGTCTCTCAACAATCTTGCCGTTGATTTTGAGAAGGTAGGACCG--CTCCAACGTCT 287509
Query 139979 TGTAGCCAAAGTACCTATAGTTGAAATCG 140007
|| ||||||| || ||||||||||||
Sbjct 287508 TGAAGCCAAAATATTGGTAGTTGAAATCG 287480
>seq92
Length=114681
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | ||||| || || ||||| ||||| || ||||| || || | | |
Sbjct 39579 ATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACTATCACCCTCGAGGTGGAGTCTAGC 39520
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 39519 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 39460
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || ||||||||||||| || ||||| |||||| | | | | || ||||| |||
Sbjct 39459 CAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTTTCGGATTACAAC 39400
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || || ||| | ||| |||| |||| || ||
Sbjct 39399 ATCCAGAAGGAGAGCACCCTCCACCTCGTGCTGCGTCTGCGTGGTGG 39353
>seq25
Length=549874
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || || |||||||| || || || | || || || | |
Sbjct 482670 GATGCAGATCTTTGTCAAGACTCTCACCGGTAAGACGATCACCTTGGAGGTGGAGTCTTC 482611
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||||| | || | ||||| |||||||| || || ||||| || |||||||| ||
Sbjct 482610 CGACACAATCGACAACGTAAAGTCGAAGATCCAGGATAAGGAAGGCATTCCTCCCGACCA 482551
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| ||||||| ||||| || ||||| ||||| ||| | | ||||| ||
Sbjct 482550 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACCCTCAGCGATTACAA 482491
Query 24883 CATTCAAAAGGAATCGACACTACA 24906
||| || ||||| || || || ||
Sbjct 482490 CATCCAGAAGGAGTCTACCCTCCA 482467
Score = 105 bits (116), Expect = 6e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778
||||| | || || || || ||||||||||| || || | ||||||| | || |
Sbjct 482361 AAAACCTTGACGGGAAAGACGATTACGCTCGAGGTTGAGTCATCCGACACGATCGACAAC 482302
Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838
||||| |||||||| || |||||||| || |||||||| || || || |||| |||
Sbjct 482301 GTAAAGTCGAAGATCCAGGATAAAGAAGGCATTCCTCCCGACCAGCAGCGCCTGATTTTT 482242
Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898
|| || || ||||| ||||| ||| | || || || |||||||| ||||||||
Sbjct 482241 GCTGGCAAGCAGCTCGAGGACGGCCGAACCCTGAGCGACTACAACATTCAGAAGGAATCC 482182
Query 24899 ACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||| | ||| | || | || || |||
Sbjct 482181 ACCCTCCACCTTGTGCTCCGTCTTCGTGGTGGC 482149
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || ||| | || ||||| || || || || || || || || || ||| | |
Sbjct 482148 ATGCAAATATTTGTGAAGACGCTCACTGGAAAGACCATCACTCTGGAGGTGGAATCTTCA 482089
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || || ||||| ||||| || || || ||||| || ||
Sbjct 482088 GATACCATCGACAATGTGAAGAGCAAAATCCAGGACAAGGAGGGTATCCCTCCGGACCAG 482029
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||| | |||||||| || || |||||||||||| | | | || || ||
Sbjct 482028 CAACGTCTCATCTTTGCTGGTAAGCAGCTGGAGGATGGACGTACGCTAAGCGACTACAAT 481969
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||||||| |||||| | ||| | || | || ||||| || ||
Sbjct 481968 ATTCAAAAGGAGTCGACATTGCACCTAGTTCTCCGCTTGCGTGGTGG 481922
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || || | || || || || || || || ||||| ||| | |
Sbjct 481920 ATGCAAATCTTCGTGAAGACATTGACAGGGAAGACGATCACCCTGGAAGTGGAATCGTCA 481861
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || |||||||| ||||| || || || || || || |||
Sbjct 481860 GATACCATCGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAA 481801
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||| | |||||||| || || |||||||||||| | | | || || || |||
Sbjct 481800 CAACGTCTCATCTTTGCTGGTAAGCAGCTGGAGGATGGGCGCACTCTGAGTGACTACAAC 481741
Query 24884 ATTCAAAAGGAATCGACACTACA 24906
||||| || || ||||| || ||
Sbjct 481740 ATTCAGAAAGAGTCGACCCTGCA 481718
>seq1
Length=1779776
Score = 96.9 bits (106), Expect = 3e-15
Identities = 137/190 (72%), Gaps = 2/190 (1%)
Strand=Plus/Plus
Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764
|||||||||| | || || || || || || || ||||||||||| || || || | |
Sbjct 1522472 TGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATTACGCTCGAGGTCGAGTCCTCGG 1522531
Query 24765 ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824
|||| | || | |||||| |||||||| ||||| || || || ||||| || || |
Sbjct 1522532 ACACGATCGACAATGTAAAAAGCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAGC 1522591
Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA-TTCGAGAAACATGTCAGATTATAAC 24883
| ||| | ||||| || || || ||||| ||||| | || || | || || || |||
Sbjct 1522592 AGCGTCTTATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGGACAC-TCTCCGACTACAAC 1522650
Query 24884 ATTCAAAAGG 24893
|| |||||||
Sbjct 1522651 ATCCAAAAGG 1522660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449896255930920
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