Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq13 185 8e-42 seq92 113 4e-20 seq25 111 1e-19 seq1 96.9 3e-15 >seq13 Length=863668 Score = 185 bits (204), Expect = 8e-42 Identities = 975/1529 (64%), Gaps = 62/1529 (4%) Strand=Plus/Minus Query 138507 GACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAA 138566 |||||| || || || ||||| || |||||| ||||||||| ||| |||| ||||| Sbjct 288974 GACCTGGAACTCGCCTGCCAAGACGCGACGAGAGTAAATGTTTGAAGTGTAAGGTTCAAA 288915 Query 138567 CGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAG 138626 | |||||||| |||| ||||| | ||| | || || ||||| |||| | ||| Sbjct 288914 GCACTCGTTGTTACCCAAGATCTGCGAGGTGCTAGCAGTTGGCATAGGAGCCATGAGAAG 288855 Query 138627 AGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATC 138686 | ||| |||| ||| || ||||||| | || ||||| | | ||||||||| | ||| Sbjct 288854 ACTATTGCGTACACCATGCTGCTTGATCTGCTCTTTGAGAGCAGCCCAGTCCCAAAGATC 288795 Query 138687 GCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTG----- 138741 || | | ||||||||||||||| | || || ||| | || | Sbjct 288794 AGAGGGGGTAACATCCCACATATCGTACTGGAGGATGCC-----TTGGGAAACAGGTGAA 288740 Query 138742 CCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCG-TTGCTCGCCTCGAGCGC 138800 || ||||| | | || ||| | ||| || | ||| ||| | || | || Sbjct 288739 CCCTCGTAAGTAGAATAAGTACCCTCCACTTTAGCAATCTCCATTGATGCAGTCAAA-GC 288681 Query 138801 ACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTC-GGCGCTCTCGT 138859 | | | ||| ||||| ||| ||||||| |||||| || ||||| || | | || Sbjct 288680 AGCGTGGTACATAGTCTCGAAGATCTGCTTGTTGAGCTGCCGAGCCTCTGGTGAT-TCAA 288622 Query 138860 ACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGC 138919 | ||||||||||| ||| | |||||||| ||||| || || | || | ||| | Sbjct 288621 AAGGCATGCGGAGGGCGAGGAAGGTATCGGCCAGACCTTGGACACCAAGACCAATAGGTC 288562 Query 138920 GATGGCGCAGATTTGACGCTTTTGCG-GCTTCGATA---GGATAATAGTTTACATCGATG 138975 | || |||| ||| ||| || || || || ||| || |||| |||| | |||||| Sbjct 288561 GGTGACGCATATT----GCTGTTACGTGCCTCAATAACAGGGTAATGGTTTGCGTCGATG 288506 Query 138976 ATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTAT 139035 | ||||| | ||| || || || || | ||| | | || || || | || Sbjct 288505 ACCTTGTTCAGATTGCGGACAACAACTTGAGTAACCTCATGTAGCTTTTGGAAGTTATA- 288447 Query 139036 GTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAA--ATCGAGGCTATGT 139093 || | | ||| || | || || ||| | || || || || |||| || Sbjct 288446 --GCTCTCTGTGT----GATAA--TCCACGAAT--GATGGCAGGGCCATAGATGCTAGGT 288397 Query 139094 TGCACACCGCCACTTCGTCGGGGTCGCTGTAT--TCGACAATTTCGGCACACAAATTACT 139151 |||| || || ||||| || ||| |||| || |||| || |||| || | ||| Sbjct 288396 TGCAAACAGCAACTTCATCTGGG--GCTGAATACTCGATGATCTCGGTGCAGAGATTGGA 288339 Query 139152 ACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAG 139211 | ||| || |||||||| | || ||||| || || || | ||| ||||| || Sbjct 288338 GCTGCGGATTGTGCCTAAATTCTTCTGGTTGCTCTTGCGATTGGCATGATCCTTGTAGAG 288279 Query 139212 CATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGC 139271 ||| | || |||| ||||| || | || | ||| | | | | | ||| Sbjct 288278 CATGAAGGGGTTGCCGGTTTCTGTCTGAGCTTCGAGGATGGCATACCAGAGCTTCTGAGC 288219 Query 139272 TTGTATTT---GACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAA 139328 | ||| | | || || | || | ||| ||| |||||||||| | || || Sbjct 288218 CTTTATCTTCTGGCGGCCGCGACCCTCAGC---CTCATACGTTTCGTAGAGAGCCTCAAA 288162 Query 139329 TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATAC 139388 ||||||||| | |||| ||| || | |||| | || ||||| |||| ||| | Sbjct 288161 CTCATCACCGTAGACATCAGCAAGGCCGGGGCACTCATTCGGGCACATCAGCGTCCACTC 288102 Query 139389 GCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATC 139448 ||||||| | ||| ||| ||||||| ||||| || ||||| | || || | | || Sbjct 288101 GCCGTTCTTTTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGGGCCAAGAAGAGGTC 288042 Query 139449 GCG--CGCCTTCTTATCTTCCGAACCCATGTTACGTTT-CATGTTAAGGAAATCAAAAAC 139505 || ||| ||| | ||| |||||| | | || || | ||||| ||||| || Sbjct 288041 ACGAGCGCGAACTT--CCTCCTT-CCCATGATTCTTTCGCAGATCTAGGAACTCAAACAC 287985 Query 139506 GTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTG 139562 || | |||||||||||| ||||||||||| | ||||| ||| ||| |||||||| Sbjct 287984 ATCCGAGTGCCATGGTTCAAGATAGATGGCGAAGGCGCCAGGCCGCTTGTTACCACCTTG 287925 Query 139563 ATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGT 139622 |||||||| || | | |||||||| || |||| ||| || | | |||| | | ||| Sbjct 287924 ATCGACGTAACGAGCCGTGTTATTGAAGACACGCAGCATGGGAACAATACCGTTAGATGT 287865 Query 139623 TCCGTTGGTGCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGAT 139682 ||||| || | | |||| | | || |||| | || ||||||| ||| || Sbjct 287864 ACCGTTAGTTCCAGCGATGTAAGAGCCCGTGGCACGGATGCGGTGAACATTGAGGCCAAT 287805 Query 139683 TCCGCC-GCCAAATTTGGATATTAAAACGCAATCGCGT-AATGTCTCGTATATACCTCTT 139740 || || |||| ||| || || | | | | || | | || || || || || || Sbjct 287804 GCCTCCAGCCATCTTT-GAAATCATAGCAC-ATGTCTTCAAGGTATCATAAATTCCCTCG 287747 Query 139741 ATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCG 139800 ||||| ||||||| ||| ||| | || || ||||| | || ||| | || ||| Sbjct 287746 ATGCTATCGTCCTTCATGTCGACTAAGAAACAAGACGACATCTGGGGTTGCGGTGTTCCG 287687 Query 139801 GCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTT 139860 || || || || ||| || || ||||| | || ||||| | | ||| || Sbjct 287686 GCATTGAAGAGTGTCGGAGAAGCATGGGTGAAGAATTTAAGGGACATGAGGTTGTAGGTC 287627 Query 139861 TCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGT 139920 |||| | | ||| | || || ||| ||| ||||| | || ||||| | ||| || Sbjct 287626 TCGAGGACCCTCTCGATGTCGTCTCCCCAGATGCCGACCGCCACGCGCATGATCATGTGC 287567 Query 139921 TGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATA--ACCGTTCTCTAGGGTCT 139978 || | || | | | ||| | |||||| || || |||| ||| | |||| Sbjct 287566 TGAGGTCTCTCAACAATCTTGCCGTTGATTTTGAGAAGGTAGGACCG--CTCCAACGTCT 287509 Query 139979 TGTAGCCAAAGTACCTATAGTTGAAATCG 140007 || ||||||| || |||||||||||| Sbjct 287508 TGAAGCCAAAATATTGGTAGTTGAAATCG 287480 >seq92 Length=114681 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| || || ||||| ||||| || ||||| || || | | | Sbjct 39579 ATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACTATCACCCTCGAGGTGGAGTCTAGC 39520 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 39519 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 39460 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||||| || ||||| |||||| | | | | || ||||| ||| Sbjct 39459 CAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTTTCGGATTACAAC 39400 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || ||| | ||| |||| |||| || || Sbjct 39399 ATCCAGAAGGAGAGCACCCTCCACCTCGTGCTGCGTCTGCGTGGTGG 39353 >seq25 Length=549874 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || |||||||| || || || | || || || | | Sbjct 482670 GATGCAGATCTTTGTCAAGACTCTCACCGGTAAGACGATCACCTTGGAGGTGGAGTCTTC 482611 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||||| | || | ||||| |||||||| || || ||||| || |||||||| || Sbjct 482610 CGACACAATCGACAACGTAAAGTCGAAGATCCAGGATAAGGAAGGCATTCCTCCCGACCA 482551 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||| ||||| || ||||| ||||| ||| | | ||||| || Sbjct 482550 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACCCTCAGCGATTACAA 482491 Query 24883 CATTCAAAAGGAATCGACACTACA 24906 ||| || ||||| || || || || Sbjct 482490 CATCCAGAAGGAGTCTACCCTCCA 482467 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 ||||| | || || || || ||||||||||| || || | ||||||| | || | Sbjct 482361 AAAACCTTGACGGGAAAGACGATTACGCTCGAGGTTGAGTCATCCGACACGATCGACAAC 482302 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 ||||| |||||||| || |||||||| || |||||||| || || || |||| ||| Sbjct 482301 GTAAAGTCGAAGATCCAGGATAAAGAAGGCATTCCTCCCGACCAGCAGCGCCTGATTTTT 482242 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 || || || ||||| ||||| ||| | || || || |||||||| |||||||| Sbjct 482241 GCTGGCAAGCAGCTCGAGGACGGCCGAACCCTGAGCGACTACAACATTCAGAAGGAATCC 482182 Query 24899 ACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||| | ||| | || | || || ||| Sbjct 482181 ACCCTCCACCTTGTGCTCCGTCTTCGTGGTGGC 482149 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || ||||| || || || || || || || || || ||| | | Sbjct 482148 ATGCAAATATTTGTGAAGACGCTCACTGGAAAGACCATCACTCTGGAGGTGGAATCTTCA 482089 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || || ||||| ||||| || || || ||||| || || Sbjct 482088 GATACCATCGACAATGTGAAGAGCAAAATCCAGGACAAGGAGGGTATCCCTCCGGACCAG 482029 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | |||||||| || || |||||||||||| | | | || || || Sbjct 482028 CAACGTCTCATCTTTGCTGGTAAGCAGCTGGAGGATGGACGTACGCTAAGCGACTACAAT 481969 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||| |||||| | ||| | || | || ||||| || || Sbjct 481968 ATTCAAAAGGAGTCGACATTGCACCTAGTTCTCCGCTTGCGTGGTGG 481922 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || | || || || || || || || ||||| ||| | | Sbjct 481920 ATGCAAATCTTCGTGAAGACATTGACAGGGAAGACGATCACCCTGGAAGTGGAATCGTCA 481861 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| || || || || || || ||| Sbjct 481860 GATACCATCGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAA 481801 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | |||||||| || || |||||||||||| | | | || || || ||| Sbjct 481800 CAACGTCTCATCTTTGCTGGTAAGCAGCTGGAGGATGGGCGCACTCTGAGTGACTACAAC 481741 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 ||||| || || ||||| || || Sbjct 481740 ATTCAGAAAGAGTCGACCCTGCA 481718 >seq1 Length=1779776 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764 |||||||||| | || || || || || || || ||||||||||| || || || | | Sbjct 1522472 TGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATTACGCTCGAGGTCGAGTCCTCGG 1522531 Query 24765 ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824 |||| | || | |||||| |||||||| ||||| || || || ||||| || || | Sbjct 1522532 ACACGATCGACAATGTAAAAAGCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAGC 1522591 Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA-TTCGAGAAACATGTCAGATTATAAC 24883 | ||| | ||||| || || || ||||| ||||| | || || | || || || ||| Sbjct 1522592 AGCGTCTTATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGGACAC-TCTCCGACTACAAC 1522650 Query 24884 ATTCAAAAGG 24893 || ||||||| Sbjct 1522651 ATCCAAAAGG 1522660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896255930920