Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq14 84.2 9e-11 >seq14 Length=817888 Score = 84.2 bits (92), Expect = 9e-11 Identities = 116/162 (72%), Gaps = 3/162 (2%) Strand=Plus/Plus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| |||| | ||| || |||||||| ||||||||||| | |||||||||| ||| || Sbjct 139002 CTCGATCAGATGGGCAATCGTCATACGTGAAGGAATGGCGTGCGGGTTGATGATAATATC 139061 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTTCAGGTACAATCAAACCAAT 309803 || || || | || |||| ||||| ||||| | | | | ||| ||| || Sbjct 139062 GGGGACGATACCCTCG---CGGGTGAAGGGCATGTCTTCGTTACGAAACGTCACACCGAT 139118 Query 309804 AGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 || ||||| || |||| | || ||||||||||||||||| Sbjct 139119 CGTACCCTTCTGCCCGTGACGTGAGGCAAACTTGTCACCAAT 139160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951968422688392