Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq13 185 8e-42 seq25 136 4e-27 seq92 123 2e-23 seq1 113 4e-20 >seq13 Length=863668 Score = 185 bits (204), Expect = 8e-42 Identities = 993/1549 (64%), Gaps = 57/1549 (4%) Strand=Plus/Minus Query 148258 GATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGA-TACACGTTGCTCGTAAAC 148316 |||| || ||||| |||||||| || | ||||| || ||| || | ||| || | Sbjct 288981 GATTGACGACCTGGAACTCGCCTGCCAAGACGCGACG-AGAGTAAATGTTTGAAGTGTAA 288923 Query 148317 GGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCT 148376 |||||||| |||||||||| ||||| ||||||| ||| | || || ||||| || Sbjct 288922 GGTTCAAAGCACTCGTTGTTACCCAAGATCTGCGAGGTGCTAGCAGTTGGCATAGGAGCC 288863 Query 148377 ACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTC-AGAGCCGCCCAGTC 148435 | || || ||||| | ||| | | || || | || ||| ||||| |||||||| Sbjct 288862 ATGAGAAGACTATTGCGTACACCATGCTGCTTGATCT-GCTCTTTGAGAGCAGCCCAGTC 288804 Query 148436 CCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAGCGGG 148495 ||| || || || || || | |||||| |||||||| || ||||| || | | || Sbjct 288803 CCAAAGATCAGAGGGGGTAACATCCCACATATCGTACTGGAGGATGCCTTGGGAAACAGG 288744 Query 148496 GCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCA--GCTCGCCTCG 148553 |||||||| | || | || | | | || | || || | | || Sbjct 288743 TGAACCCTCGTAAGTAGAATAAGTACCCTCCACTTTAGCAATCTC-CATTGATGCAGTCA 288685 Query 148554 AGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCGCT- 148612 | || ||| ||| || |||||| || ||| |||||||| || ||| || | Sbjct 288684 AA-GCAGCGTGGTACATAGTCTCGAAGATCTGCTTGTTGAGCTGCCGAGCCT-CTGGTGA 288627 Query 148613 TTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAAT 148672 ||| | ||||| || || | || | ||||| || || || || || | ||||| Sbjct 288626 TTCAAAAGGCATGCGGAGGGCGAGGAAGGTATCGGCCAGACCTTGGACACCAAGACCAAT 288567 Query 148673 GGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GGATAGTGGTTGCGGTCGA 148731 || ||||| || ||| | || || ||| | | || || ||||| ||||| Sbjct 288566 AGGTCGGTGACGCATATTGCTGTTACGTGC-CTCAATAACAGGGTAATGGTTTGCGTCGA 288508 Query 148732 TGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATCGT 148791 ||| ||||| |||||||| || || || | |||| | ||| || || | | Sbjct 288507 TGACCTTGTTCAGATTGCGGACAACAACTTGAGTAACCTCATGTAGCTTTTGGAAGTTAT 288448 Query 148792 ACTTGTC---------ATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACA 148842 | | || ||| |||| || | || ||| ||||| ||||| ||||| | Sbjct 288447 AGCTCTCTGTGTGATAATCCACGAATGATGG---CAGGGCCATAGATGCTAGGTTGCAAA 288391 Query 148843 CGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGA 148902 | || ||||| ||||| ||||| | |||||||| ||| |||||| || || Sbjct 288390 CAGCAACTTCATCTGGGGCTGAATACTCGATGATCTCGGTGCAGAGATTGGAGCTGCGGA 288331 Query 148903 TCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTG-CACGCGTCCTTGTACAGCATGTAC 148961 | ||| | ||||| || |||||||||| ||| || | |||||||| |||||| | Sbjct 288330 TTGTGCCTAAATTCTTCTGGTTGCTCTTGCGATTGGCATGA-TCCTTGTAGAGCATGAAG 288272 Query 148962 GGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--AACCGATGCAGGTCCTGCGCGCGCA 149019 || ||| ||||| ||| | ||| | ||| | | | || | ||| || | Sbjct 288271 GGGTTGCCGGTTTCTGTCTGAGCTTCGAGGATGGCATACCAG--AGCTTCTGAGCCTTTA 288214 Query 149020 CTTGCTGCTCGTAGCGACCCTCCTGCTCGTA--TAAAGTATACAGCCGCTCGAACGCCTC 149077 | ||| | ||||||||| ||| || | ||| | |||| || ||| | || Sbjct 288213 TCTTCTGGCGGCCGCGACCCTCAGCCTCATACGTTTCGTAGAGAGCC--TCAAACTCATC 288156 Query 149078 GCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTC 149137 |||||| ||| | || |||||||||| | ||||||||| |||| |||| |||||| Sbjct 288155 ACCGTAGACATCAGCAAGGCCGGGGCACTCATTCGGGCACATCAGCGTCCACTCGCCGTT 288096 Query 149138 CGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGC 149197 | | || |||||||| || ||||| || | ||| || || | | |||||| || || Sbjct 288095 CTTTTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGGGCCAAGAAGAGGTCACGAGC 288036 Query 149198 CTTGCAGTCTTCGGCG--CCCATGTTGCGG-CGCAGGTTGAGCACGCTGAATATGTCCGC 149254 || |||| | |||||| | | ||||| | || | || | |||| Sbjct 288035 ---GCGAACTTCCTCCTTCCCATGATTCTTTCGCAGATCTAGGAACTCAAACACATCCGA 287979 Query 149255 GTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG---CCGCCCTGGTCGAC 149311 |||||| || |||| || | |||| ||||| |||||| || || || ||||| Sbjct 287978 GTGCCATGGTTCAAGATAGATGGCGAAGGCGCCAGGCCGCTTGTTACCACCTTGATCGAC 287919 Query 149312 GTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTT 149371 || || || |||| || || || || | ||| || |||| || | | || ||||| Sbjct 287918 GTAACGAGCCGTGTTATTGAAGACACGCAGCATGGGAACAATACCGTTAGATGTACCGTT 287859 Query 149372 AGTAG-AGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGC 149430 ||| ||| | || | ||| || || | ||| || |||| ||| ||||| | Sbjct 287858 AGTTCCAGCGA-TGTAAGAGCCCGTGGCACGGATGCGGTGAACATTGAGGCCAATGCCTC 287800 Query 149431 C-GCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCGAGTAGATGCCCTCGATGCT 149488 | ||| | |||||| || || || ||| | || || || || ||||||||||| Sbjct 287799 CAGCCAT-CTTTGAAATCATAGCACATGTCTTCAAG-GTATCATAAATTCCCTCGATGCT 287742 Query 149489 GTCGCGCTTCATGGTCAGC--AGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCC 149546 ||| |||||| ||| | ||||| || || |||| || || | || ||||| Sbjct 287741 ATCGTCCTTCAT-GTCGACTAAGAAA-CAAGACGACATCTGGGGTTGCGGTGTTCCGGCA 287684 Query 149547 GCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTACGACTCG 149606 ||| | || || || || || || |||| || ||| | | ||| | |||| Sbjct 287683 TTGAAGAGTGTCGGAGAAGCATGGGTGAAGAATTTAAGGGACATGAGGTTGTAGGTCTCG 287624 Query 149607 AGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGC 149666 || || | || ||||| || || |||||| | || |||||||| | ||| ||||| Sbjct 287623 AGGACCCTCTCGATGTCGTCTCCCCAGATGCCGACCGCCACGCGCATGATCATGTGCTGA 287564 Query 149667 GGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAG--CCGTTTTCTAGTGTCTTGT 149724 |||| ||| | | ||| |||||||| | |||| ||| || | |||||| Sbjct 287563 GGTCTCTCAACAATCTTGCCGTTGATTTTGAGAAGGTAGGACCG--CTCCAACGTCTTGA 287506 Query 149725 AGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTC 149773 ||||||| || | ||||| || |||||| ||| ||||||| | ||| Sbjct 287505 AGCCAAAATATTGGTAGTTGAAATCGCGGTCGTATACAATGGCAGAGTC 287457 >seq25 Length=549874 Score = 136 bits (150), Expect = 4e-27 Identities = 155/206 (75%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGC 133514 ||| | ||| ||||| ||||| || |||||||||| | || || || ||||||||| Sbjct 482466 ATGGAGGGTAGACTCCTTCTGGATGTTGTAATCGCTGAGGGTTCGGCCG--TCCTCGAGC 482523 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| ||| | || || ||||||||||||||||| ||||||||||| || |||| Sbjct 482524 TGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGAATGCCTTCCTTATCCTGGATC 482583 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | || | ||||||| | |||||| || | ||||| || || ||| Sbjct 482584 TTCGACTTTACGTTGTCGATTGTGTCGGAAGACTCCACCTCCAAGGTGATCGTCTTACCG 482643 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| || || || |||||||| Sbjct 482644 GTGAGAGTCTTGACAAAGATCTGCAT 482669 Score = 113 bits (124), Expect = 4e-20 Identities = 140/190 (74%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTG 133520 |||||| || ||||| || ||||| |||| || || || || ||||||||||||||| Sbjct 482179 GGTGGATTCCTTCTGAATGTTGTAGTCGCTCAGGGTTCGGCCG--TCCTCGAGCTGCTTG 482236 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || || |||| || ||||||||||||||||| |||||||| || || |||||| | Sbjct 482237 CCAGCAAAAATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCTTTATCCTGGATCTTCGAC 482296 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | | || | |||||||| | ||| || |||| || | || || || |||| Sbjct 482297 TTTACGTTGTCGATCGTGTCGGATGACTCAACCTCGAGCGTAATCGTCTTTCCCGTCAAG 482356 Query 133641 GTTTTTACGA 133650 ||||| |||| Sbjct 482357 GTTTTGACGA 482366 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||| ||||||||||| || ||||| || | || ||| | ||||| ||||| Sbjct 481717 ATGCAGGGTCGACTCTTTCTGAATGTTGTAGTCACTCAGAGTGCGCCCATCCTCCAGCTG 481776 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| || || | ||||| || || ||||| || ||||| || |||||||| |||||| Sbjct 481777 CTTACCAGCAAAGATGAGACGTTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTT 481836 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | || | || || | | ||||| || | ||||| || || || || Sbjct 481837 GCTCTTCACATTGTCGATGGTATCTGACGATTCCACTTCCAGGGTGATCGTCTTCCCTGT 481896 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 || || || ||||| || ||||| Sbjct 481897 CAATGTCTTCACGAAGATTTGCAT 481920 >seq92 Length=114681 Score = 123 bits (136), Expect = 2e-23 Identities = 149/201 (74%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTG 133520 |||| ||| ||||| || |||||||| | | | | ||| ||||||||||||||| Sbjct 39382 GGTGCTCTCCTTCTGGATGTTGTAATC--CGAAAGGGTACGGCCATCCTCGAGCTGCTTG 39439 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || || | || || ||||||||||| || |||||||| |||||||| |||||| | Sbjct 39440 CCGGCAAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGAC 39499 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | || | |||||| | | |||||| |||| ||||| || || || || || Sbjct 39500 TTGACATTGTCGATGGTGTCGCTAGACTCCACCTCGAGGGTGATAGTCTTACCCGTGAGG 39559 Query 133641 GTTTTTACGAAAATCTGCATG 133661 ||||| ||||| ||||||||| Sbjct 39560 GTTTTGACGAAGATCTGCATG 39580 >seq1 Length=1779776 Score = 113 bits (124), Expect = 4e-20 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||||||||||||||| ||| | || || ||||||||||| ||||||||||| ||||| Sbjct 1522626 GTCCTCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGAGGGATGCCCTCCTT 1522567 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| |||||| || | | || | |||||| | || ||| || |||| || | Sbjct 1522566 GTCCTGGATCTTGCTTTTTACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTAAT 1522507 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCA 133659 ||| ||||| || || || || ||||| ||||||| Sbjct 1522506 GGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCA 1522472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419355780360