Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq92 111 1e-19 seq25 87.8 1e-12 >seq92 Length=114681 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | || ||| | ||| | || || |||||||| || || ||||||||||| | Sbjct 39351 CACCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCCG 39410 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | || || || | || || | || || |||||||| |||| |||||||| || | | Sbjct 39411 AAAGGGTACGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCAGGGG 39470 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | || || ||||| || || | | |||| ||| | ||||||||| || ||| Sbjct 39471 GGATGCCCTCCTTGTCCTGGATCTT-GGACTTGACATTGTCGATGGTGTCGCTAGACTCC 39529 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| || ||||| || | ||||| || ||||||||||| Sbjct 39530 ACCTCGAGGGTGATAGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 39579 >seq25 Length=549874 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| | ||| | ||| || || ||| || || |||||||||||| ||| || || | Sbjct 482454 ACGGAGCACGAGATGGAGGGTAGACTCCTTCTGGATGTTGTAATCGCTGAGGGTTCGGCC 482513 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 ||| || | || || ||||| || |||| ||||||||| || | || | ||||| || Sbjct 482514 GTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGAATGCCTTCCTT 482573 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 || || ||| | | || | ||| | |||||| || ||||| || | |||| Sbjct 482574 ATCCTGGATCTTC-GACTTTACGTTGTCGATTGTGTCGGAAGACTCCACCTCCAAGGTGA 482632 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || | || || |||||||||||||| Sbjct 482633 TCGTCTTACCGGTGAGAGTCTTGACAAAGATCTGCAT 482669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703042546880