Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq25 114 3e-20 >seq25 Length=549874 Score = 114 bits (126), Expect = 3e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || ||||| || || |||||||| ||||| ||||| ||| ||| Sbjct 482666 CAGATCTTTGTCAAGACTCTCACCGGTAAGACGATCACCTTGGAGGTGGAGTCTTCCGAC 482607 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| |||| |||||| ||||| || || || ||||| ||| || ||| || Sbjct 482606 ACAATCGACAACGTAAAGTCGAAGATCCAGGATAAGGAAGGCATTCCTCCCGACCAGCAG 482547 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||||||||| |||||| | || || || | || | |||||||||| || Sbjct 482546 CGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACCCTCAGCGATTACAACATC 482487 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| |||||||| || || || || Sbjct 482486 CAGAAGGAGTCTACCCTCCATCTCGT 482461 Score = 86.0 bits (94), Expect = 1e-11 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 ||||| || |||||||| ||||||||||| || || || |||| || ||| Sbjct 481896 ACAGGGAAGACGATCACCCTGGAAGTGGAATCGTCAGATACCATCGACAATGTGAAGAGC 481837 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || || || || || |||||| ||| | || ||||| || || ||| Sbjct 481836 AAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAACAACGTCTCATCTTTGCTGGTAAG 481777 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| |||| ||||| | ||| || || |||||| | ||||||||||| || || || Sbjct 481776 CAGCTGGAGGATGGGCGCACTCTGAGTGACTACAACATTCAGAAAGAGTCGACCCTGCAT 481717 Query 206374 CTTGT 206378 || || Sbjct 481716 CTAGT 481712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181817181043119