Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq13 250 3e-61 seq37 91.5 2e-13 >seq13 Length=863668 Score = 250 bits (276), Expect = 3e-61 Identities = 898/1392 (65%), Gaps = 27/1392 (2%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| ||||||| ||||| ||||||||||| || || ||||||||||| || | |||| Sbjct 288941 GTAAATGTTTGAAGTGTAAGGTTCAAAGCACTCGTTGTTACCCAAGATCTGCGAGGTGCT 288882 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 || |||||||| || ||||| | |||||| || || | ||| | || |||||| | || Sbjct 288881 AGCAGTTGGCATAGGAGCCATGAGAAGACTATTGCGTACACCATGCTGCTTGATCTGCTC 288822 Query 110827 CTTGAGAACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGA 110884 |||||| || |||||| | || | || || | | | |||||||| || |||| Sbjct 288821 TTTGAGAGCAGCCCAGTCCCAAAGATCAGAGGGGGT--AACATCCCACATATCGTACTGG 288764 Query 110885 AGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCC 110944 || | |||||||| | || |||||||| | || ||| | ||| | ||| ||| Sbjct 288763 AGGATGCCTTGGGAAACAGGTGAACCCTCGTAAGTAGAATAAGTACCCTCCACTTTAGCA 288704 Query 110945 A-ATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003 | | || | | || || | ||||| ||||| || || ||||| | || | Sbjct 288703 ATCTCCATTGAT-GCAGTCAAAGCAGCGTGGTACATAGTCTCGAAGATCTGCTTGTTGAG 288645 Query 111004 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACC 111063 || | || || ||| ||||| | |||| | || ||| || ||||| Sbjct 288644 CTGCCGAGCCTCTGGTGATTCAAAAGGCATGCGGAGGGCGAGGAAGGTATCGGCCAGACC 288585 Query 111064 TTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC---AAC 111120 ||| ||||| | ||||||||||| ||| |||||||| || || || ||| ||| Sbjct 288584 TTGGACACCAAGACCAATAGGTCGGTGACGCATATTGCTGTTACGTGC---CTCAATAAC 288528 Query 111121 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 111180 || ||| ||| ||| ||||| ||| ||||| | ||||| | || | || Sbjct 288527 AGGGTAATGGTTTGCGTCGATGACCTTGTTCAGATTGCGGACAACAACTTGAGTAACCTC 288468 Query 111181 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGAT 111240 ||| || |||| | | | | | || | | || || | ||| ||||| || Sbjct 288467 ATGTAGCTTTTGGAAGTTATAGCTCTCTGTGTGATAATCCACGAATGATGGCAGGGCCAT 288408 Query 111241 TGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACA 111300 ||||| | ||||||||||| ||||| ||| ||||| | || || || || Sbjct 288407 AGATGCTAGGTTGCAAACAGCAACTTCATCTGGGGCTGAATACTCGATGATCTCGGTGCA 288348 Query 111301 TAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTT-CTTGTTGCACGCAT 111359 | ||||| || || || || |||||||| ||||| ||||| | | ||| | || Sbjct 288347 GAGATTGGAGCTGCGGATTGTGCCTAAATTCTTCTGGTTGCTCTTGCGATTGGCATG-AT 288289 Query 111360 CCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-A 111418 |||||||||||||| |||| | || || || ||||| | || ||| || || | ||| | Sbjct 288288 CCTTGTAGAGCATGAAGGGGTTGCCGGTTTCTGTCTGAGCTTCGAGGATGGCATACCAGA 288229 Query 111419 ACATCGGCGGC-TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAG 111477 | || | | | | | ||||| | | || ||||| ||||| ||| || |||||| Sbjct 288228 GCTTCTGAGCCTTTATCTTCTGGCG--GCCGCGACCCTCAGCCTCATACGTTTCGTAGAG 288171 Query 111478 GGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAG 111537 || |||||||| ||||| | || | || || || || | || || | || Sbjct 288170 AGCCTCAAACTCATCACCGTAGACATCAGCAAGGCCGGGGCACTCATTCGGGCACATCAG 288111 Query 111538 AGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGA 111597 | ||| | || | || || ||||||||||| || || || ||||| |||| | Sbjct 288110 CGTCCACTCGCCGTTCTTTTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGGGCCAA 288051 Query 111598 AAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTC 111657 ||||| || | | ||| | || || | || || || ||| | || |||||||| Sbjct 288050 GAAGAGGTCACGAGCGCGAACTTCCTCCTTCCCATGATTCTTTCGCAGATCTAGGAACTC 287991 Query 111658 CATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGATCCCTTTCGACG 111711 | | ||||| ||||||||| |||||||||| |||| || | ||| | Sbjct 287990 AAACACATCCGAGTGCCATGGTTCAAGATAGATGGCGAAGGCGCCAGGCCGCTTGTTA-- 287933 Query 111712 CCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACC 111771 ||| |||||| || || || || ||| || || || || ||||| |||| |||||| Sbjct 287932 -CCACCTTGATCGACGTAACGAGCCGTGTTATTGAAGACACGCAGCATGGGAACAATACC 287874 Query 111772 ATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTG 111831 | ||| ||| || || || || ||| |||| | | || | | Sbjct 287873 GTTAGATGTACCGTTAGTTCCAGCGATGTAAGAGCCCGTGGCACGGATGCGGTGAACATT 287814 Query 111832 CATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGAT 111891 | ||||| || |||||| |||||| || ||||| | | | || |||| || Sbjct 287813 GAGGCCAATGCCTCCAGCCATCTTTGAAATCATAGCACATGTCTTCAAGGTATCATAAAT 287754 Query 111892 ACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGG 111951 || | ||| || ||||| || ||| | ||| ||| |||||||| ||| || Sbjct 287753 TCCCTCGATGCTATCGTCCTTCATGTCGACTAAGAAACAAGACGACATCTGGGGTTGCGG 287694 Query 111952 TGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTC 112011 ||| || ||||||||||| || || | || || |||| | ||||||| || Sbjct 287693 TGTTCCGGCATTGAAGAGTGTCGGAGAAGCATGGGTGAAGAATTTAAGGGACATGAGGTT 287634 Query 112012 GTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAA 112071 ||| ||||| | ||| || ||||| || || |||||||| || || ||||||| Sbjct 287633 GTAGGTCTCGAGGACCCTCTCGATGTCGTCTCCCCAGATGCCGACCGCCACGCGCATGAT 287574 Query 112072 CATGTACTGTGG 112083 ||||| ||| || Sbjct 287573 CATGTGCTGAGG 287562 >seq37 Length=418716 Score = 91.5 bits (100), Expect = 2e-13 Identities = 149/211 (71%), Gaps = 8/211 (4%) Strand=Plus/Minus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || || |||||||| || ||||| || || || || ||||| || || Sbjct 51560 GGCAAAGTCGGTATGAAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAAGTCAGGCC 51501 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777 ||||| ||||| |||||||| | ||| | |||| ||| | || ||||||||| Sbjct 51500 AGGCATCAGACCACGCTTCTTGAGCCAGAAGATAGATGCGAAAGCACCACTGAAGAAGAT 51441 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGC-ATC-- 122834 |||||||||| ||||| |||| | ||| | ||| |||| | ||| |||| ||| Sbjct 51440 ACCCTCCACAGCGGCAAAGGCAATCAAGCGCTGGGCAAAGGTG-GAG---TTGCGATCGC 51385 Query 122835 -AAACCATTTCATTGCCCATTTCGCCTTCTT 122864 || ||| |||| ||||| | |||||||| Sbjct 51384 TAATCCACTTCAGGGCCCAGTCAGCCTTCTT 51354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030123754400