Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq13 280 2e-70 seq37 114 2e-20 >seq13 Length=863668 Score = 280 bits (310), Expect = 2e-70 Identities = 909/1395 (65%), Gaps = 35/1395 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| ||||||||||||| |||| || || || ||||| || ||| Sbjct 287562 CCTCAGCACATGATCATGCGCGTGGCGGTCGGCATCTGGGGAGACGACATCGAGAGGGTC 287621 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341 | ||||| ||| || ||||||| | |||| || || | || || |||||| Sbjct 287622 CTCGAGACCTACAACCTCATGTCCCTTAAATTCTTCACCCATGCTTCTCCGACACTCTTC 287681 Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401 ||||| || ||||| |||||| ||||| ||| ||| | ||| || ||||| || Sbjct 287682 AATGCCGGAACACCGCAACCCCAGATGTCGTCTTGTTTCTTAGTCGACATGAAGGACGAT 287741 Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 104461 ||| | || || |||| || | | | ||||| || |||||| |||||| Sbjct 287742 AGCATCGAGGGAATTTATGATACCTTGAAGACATGTGCTATGATTTCAAAGATGGCTGGA 287801 Query 104462 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 104521 || ||||| | | | || | | |||| ||| || || || || Sbjct 287802 GGCATTGGCCTCAATGTTCACCGCATCCGTGCCACGGGCTCTTACATCGCTGGAACTAAC 287861 Query 104522 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 104581 ||| ||| | |||||| |||| ||||| || || || || ||| || || || || Sbjct 287862 GGTACATCTAACGGTATTGTTCCCATGCTGCGTGTCTTCAATAACACGGCTCGTTACGTC 287921 Query 104582 AATCAAGCTGGGCGTCGAAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGGCAC 104635 |||||| ||| | ||| | || |||| |||||||||| ||||||||| Sbjct 287922 GATCAAGGTGG---TAACAAGCGGCCTGGCGCCTTCGCCATCTATCTTGAACCATGGCAC 287978 Query 104636 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG--CGCGGT 104693 ||||| | | |||||||| || |||| || || || | ||||| | |||| | Sbjct 287979 TCGGATGTGTTTGAGTTCCTAGATCTGCGAAAGAATCATGGGAAGGAGGAAGTTCGCGCT 288038 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 || || ||||||| || || ||||| || ||||||||||||||| | || || ||| Sbjct 288039 --CGTGACCTCTTCTTGGCCCTTTGGATCCCTGATCTCTTCATGAAGCGTGTCGAAAAGA 288096 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813 ||| | ||| | || | || || | || || || || | |||| | |||| Sbjct 288097 ACGGCGAGTGGACGCTGATGTGCCCGAATGAGTGCCCCGGCCTTGCTGATGTCTACGGTG 288156 Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGGT 104871 | |||||||| || || ||| || ||| |||| || |||| ||| | || || | | Sbjct 288157 ATGAGTTTGAGGCTCTCTACGAAACGTATGAGGCTGAGGGTC--GCGGCCGCCAGAAGAT 288214 Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 ||| | || | | ||| | || || ||| | |||| || || || || | || | Sbjct 288215 AAAGGCT-CAGAAGCTCTGGTATGCCATCCTCGAAGCTCAGACAGAAACCGGCAACCCCT 288273 Query 104931 ACATGCTTTACAAAGACGCCTG-TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989 |||||| ||||| || | || || | ||||| || || |||||||| || ||| Sbjct 288274 TCATGCTCTACAAGGA-TCATGCCAATCGCAAGAGCAACCAGAAGAATTTAGGCACAATC 288332 Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049 || ||||||||||| || || ||| | || | | ||| | |||||| ||||| Sbjct 288333 CGCAGCTCCAATCTCTGCACCGAGATCATCGAGTATTCAGCCCCAGATGAAGTTGCTGTT 288392 Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGAT 105109 || ||||| ||||| || || || || | |||||| | ||| ||| | | | Sbjct 288393 TGCAACCTAGCATCTATGGCCCTGCCATCATTCGTGGATTATCACACAGAGAGCTATAAC 288452 Query 105110 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGAT 105169 | |||| || || || ||||| || ||| | || || |||| || || || Sbjct 288453 TTCCAAAAGCTACATGAGGTTACTCAAGTTGTTGTCCGCAATCTGAACAAGGTCATCGAC 288512 Query 105170 AGAAATTTTTACCCCG---TTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226 ||| |||||| | ||||| || ||||| |||||| | ||||| || ||| Sbjct 288513 GCAAACCATTACCCTGTTATTGAG---GCACGTAACAGCAATATGCGTCACCGACCTATT 288569 Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTC 105285 ||||| ||||| || ||||| || ||| ||| || || || | | ||||| || Sbjct 288570 GGTCTTGGTGTCCAAGGTCTGGCCGATACCTTC-CTCGCCCTCCGCATGCCTTTTGAATC 288628 Query 105286 CGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA 105345 || || | | |||| || || || ||||| ||||| ||||| ||| |||| Sbjct 288629 ACCAGAGGCTCGGCAGCTCAACAAGCAGATCTTCGAGACTATGTACCACGCTGCT-TTGA 288687 Query 105346 GGCGAGTTCA---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 105402 | ||| ||| | || | || || ||| | ||| || | |||||||| || Sbjct 288688 --CTGCATCAATGGAGATTGCTAAAGTGGAGGGTACTTATTCTACTTACGAGGGTTCACC 288745 Query 105403 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGA 105462 | ||| ||||| | || || | ||||||||||| | | || || | || Sbjct 288746 TGTTTCCCAAGGCATCCTCCAGTACGATATGTGGGATGTTACCCCCTCTGATCTTTGGGA 288805 Query 105463 CTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGC 105522 ||||| |||||||| || | |||||| || | ||| | || || ||||| |||||||| Sbjct 288806 CTGGGCTGCTCTCAAAGAGCAGATCAAGCAGCATGGTGTACGCAATAGTCTTCTCATGGC 288865 Query 105523 TCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 105582 ||| |||||||| || |||| | || ||||||||||| || || ||||||||||| || Sbjct 288866 TCCTATGCCAACTGCTAGCACCTCGCAGATCTTGGGTAACAACGAGTGCTTTGAACCTTA 288925 Query 105583 CACGACGAACATCTA 105597 ||| | ||||| || Sbjct 288926 CACTTCAAACATTTA 288940 >seq37 Length=418716 Score = 114 bits (126), Expect = 2e-20 Identities = 148/203 (73%), Gaps = 6/203 (3%) Strand=Plus/Plus Query 94744 ATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTCGCGTTCCTTT 94800 |||| ||||| || || ||||| |||||||| || ||| || || ||||| Sbjct 51348 ATTCGTAAGAAGGCTGACTGGGCCCTGAAGTGGATTAGCGATCGCAACTCCA---CCTTT 51404 Query 94801 GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC 94860 || |||| | | || ||||| ||| ||||||||||||||| |||| | ||| Sbjct 51405 GCCCAGCGCTTGATTGCCTTTGCCGCTGTGGAGGGTATCTTCTTCAGTGGTGCTTTCGCA 51464 Query 94861 GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTT 94920 |||| | |||||||||||||| ||||| ||||| || || |||||||||||||| Sbjct 51465 TCTATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCTGGCCTGACTTTCTCCAACGAGCTC 51524 Query 94921 ATCTCTCGTGACGAGGGACTCCA 94943 ||||| ||||||||||| || || Sbjct 51525 ATCTCCCGTGACGAGGGTCTTCA 51547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259057508360