Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq13 334 8e-87 seq37 149 7e-31 >seq13 Length=863668 Score = 334 bits (370), Expect = 8e-87 Identities = 941/1425 (66%), Gaps = 36/1425 (3%) Strand=Plus/Minus Query 78507 GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGC-CT 78565 ||||||||| |||| | || || ||| ||||| | ||||| || || ||||| || Sbjct 288968 GAACTCGCCTGCCAAGACGCGACGAGAGTAAATGTTTGAAGTGTAAGGTTC-AAAGCACT 288910 Query 78566 CGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAAT 78625 ||||||| |||| |||||| | ||| || || ||||| || || | || ||| || Sbjct 288909 CGTTGTTACCCAAGATCTGCGAGGTGCTAGCAGTTGGCATAGGAGCCATGAGAAGACTAT 288850 Query 78626 TCCGAAGACCATGCGTCTTGATCTCGACCTTTAG----GCC--GTCCCAAAATTCATTCG 78679 | || | ||||||| |||||||| | || || ||| |||||||| ||| | Sbjct 288849 TGCGTACACCATGCTGCTTGATCTGCTCTTTGAGAGCAGCCCAGTCCCAAAGATCAGAGG 288790 Query 78680 CCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAACG 78739 | | ||||||| || || ||||| || | ||| | || || |||| | | | Sbjct 288789 GGGTAACATCCCACATATCGTACTGGAGGATGCCTTGGGAAACAGGTGAACCCTCGTAAG 288730 Query 78740 TCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAGCAGGGCCGCGTGGTACA 78799 | |||| |||||| | || || | || ||| | || || |||||||||| Sbjct 288729 TAGAATAAGTACCCTCCACTTTAGCAATCTCCATTGATGCAGTCAAAGCAGCGTGGTACA 288670 Query 78800 CAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCT-TGGTCTCGTCGAACGAAAGGCCG 78858 || ||||||||| ||||||||||| || |||| |||| || || | | || | Sbjct 288669 TAGTCTCGAAGATCTGCTTGTTGAGCTGCCGAGCCTCTGGTGAT-TCAAAAGGCATGCGG 288611 Query 78859 AGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATG 78918 || | |||| ||||||||| || ||||| || | | | || |||||||| ||||| Sbjct 288610 AGGGCGAGGAAGGTATCGGCCAGACCTTGGACACCAAGACCAATAGGTCGGTGACGCATA 288551 Query 78919 TTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTA 78978 ||||| || || ||| | |||||| ||| |||||||| |||||| || Sbjct 288550 TTGCTGTTACGTGCCTCAATAACAGGGTAATGGTTTGCGTCGATGACCTTGTTCAGATTG 288491 Query 78979 CGCGTGACGACCCGAGTCACCTC--GTACAATTTGGCGAAATCAAAATGATTTCCTT-TG 79035 || || || |||| ||||| ||| ||||| || | | | | | || | || Sbjct 288490 CGGACAACAACTTGAGTAACCTCATGTAGCTTTTGG--AAGTTATA--GCTCTCTGTGTG 288435 Query 79036 AT-------GAAAGTCGGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGG 79088 || ||| | || ||| || ||||| |||||||| || || || || || Sbjct 288434 ATAATCCACGAATGATGGCAGGGCCATAGATGCTAGGTTGCAAACAGCAACTTCATCTGG 288375 Query 79089 GCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTT 79148 | ||| ||||||||| || ||||| | ||| || ||| ||||| | ||||| Sbjct 288374 GGCTGAATACTCGATGATCTCGGTGCAGAGATTGGAGCTGCGGATTGTGCCTAAATTCTT 288315 Query 79149 CTGGTTGCTCTTCTCGTTA-CAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAA 79207 |||||||||||| || || | ||||||||| |||| | || | ||||| || Sbjct 288314 CTGGTTGCTCTTGCGATTGGCATGA-TCCTTGTAGAGCATGAAGGGGTTGCCGGTTTCTG 288256 Query 79208 CCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACC--- 79264 |||| | ||| | | | | ||||| | | | ||| | ||||| | | Sbjct 288255 TCTGAGCTTCGAGGATGGCATACCAGAGCTTCTGAGCCTTTAT---CTTCTGGCGGCCGC 288199 Query 79265 GACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCA 79324 |||||| || | ||||| ||| | | | || | || || |||||||| | | Sbjct 288198 GACCCTCAGCCTCATACGTTTCGTAGAGAGCCTCAAACTCATCACCGTAGACATCAGCAA 288139 Query 79325 GGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCA 79384 |||| |||||||| | |||||||||||| ||| || ||| ||| || || || || Sbjct 288138 GGCCGGGGCACTCATTCGGGCACATCAGCGTCCACTCGCCGTTCTTTTCGACACGCTTCA 288079 Query 79385 TGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGC 79444 ||||||| || |||||||| |||||| ||||||||| || || | ||||| | | Sbjct 288078 TGAAGAGATCAGGGATCCAAAGGGCCAAGAAGAGGTCACGAGCGCGAACTTCCTCCTTCC 288019 Query 79445 CCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGA 79504 | || ||| ||||| || || || || | | || | |||||| || || ||||||| Sbjct 288018 CATGATTCTTTCGCAGATCTAGGAACTCAAACACATCCGAGTGCCATGGTTCAAGATAGA 287959 Query 79505 TGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGA 79564 ||||||| | || |||||| || || || | |||||| || |||||||| |||| Sbjct 287958 TGGCGAAGGCGCCAGGCCGCTTGTTACCACCTTGATCGACGTAACGAGCCGTGTTATTGA 287899 Query 79565 AAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTAC 79624 | || || |||||||| || || |||| | ||||| || || ||| | | Sbjct 287898 AGACACGCAGCATGGGAACAATACCGTTAGATGTACCGTTAGTTCCAGCGATGTAAGAGC 287839 Query 79625 CGCTCGCCCGAATG-TTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGC 79683 | | || || ||| || || | || || ||||| || | | ||| || || Sbjct 287838 CCGTGGCACGGATGCGGTGAACA-TTGAGGCCAATGCCTCCAGCCATCTTTGAAATCATA 287780 Query 79684 GCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGG 79743 || || ||| | || || || || |||||||| ||||||||||| |||| | | Sbjct 287779 GCACATGTCTTCAAGGTATCATAAATTCCCTCGATGCTATCGTCCTTCATGTCGACTAAG 287720 Query 79744 AAGCAGCTCGACATCTGTGGGTTG-TTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTG 79802 || || ||||||||| |||||| || ||||| |||||||| ||||| | || || Sbjct 287719 AAACAAGACGACATCTG-GGGTTGCGGTGTTCCGGCATTGAAGAGTGTCGGAGAAGCATG 287661 Query 79803 CGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCC 79862 |||||||| || || ||| || | ||| ||||| ||| | | || |||||| || Sbjct 287660 GGTGAAGAATTTAAGGGACATGAGGTTGTAGGTCTCGAGGACCCTCTCGATGTCGTCTCC 287601 Query 79863 GTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGGCGTCTC 79907 |||||||||||| |||||||||| | || ||| || |||| Sbjct 287600 CCAGATGCCGACCGCCACGCGCATGATCATGTGCTGAGGTCTCTC 287556 Score = 286 bits (316), Expect = 4e-72 Identities = 926/1422 (65%), Gaps = 28/1422 (2%) Strand=Plus/Plus Query 19096 TGAGACGCCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCC 19155 ||||| |||||| || | ||||||| || |||||||||||| || |||||| || Sbjct 287555 TGAGAGACCTCAGCACATGATCATGCGCGTGGCGGTCGGCATCTGGGGAGACGACATCGA 287614 Query 19156 GCGAGTCCGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGAC 19215 | | |||| |||||| ||| |||| ||| || || |||||||| || || | ||||| Sbjct 287615 GAGGGTCCTCGAGACCTACAACCTCATGTCCCTTAAATTCTTCACCCATGCTTCTCCGAC 287674 Query 19216 CCTTTTCAACGCCGGTACGAA-CAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGA 19274 || ||||| ||||| || |||||| ||||||||| |||||| |||| | |||| Sbjct 287675 ACTCTTCAATGCCGGAACACCGCAACCC-CAGATGTCGTCTTGTTTCTTAGTCGACATGA 287733 Query 19275 AGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGT 19334 |||| || ||||| ||||| || || || || | ||| || || || || ||| Sbjct 287734 AGGACGATAGCATCGAGGGAATTTATGATACCTTGAAGACATGTGCTATGATTTCAAAGA 287793 Query 19335 GGTCCGGGGGTATCGGGATCCACTGCTCGAAT-ATCCGGTCGAGTGGTACACGAATCAAT 19393 | | || || || || || | || || ||||| | | || | ||| | Sbjct 287794 TGGCTGGAGGCATTGGCCTCAA-TGTTCACCGCATCCGTGCCACGGGCTCTTACATCGCT 287852 Query 19394 GGGACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCC 19453 || || ||||| | | ||||||| || || ||||| || |||||||| |||||||| Sbjct 287853 GGAACTAACGGTACATCTAACGGTATTGTTCCCATGCTGCGTGTCTTCAATAACACGGCT 287912 Query 19454 AGGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCA 19513 | |||||| | || || || ||| || ||| | ||||||||||| || || ||| Sbjct 287913 CGTTACGTCGATCAAGGTGGTAACAAGCGGCCTGGCGCCTTCGCCATCTATCTTGAACCA 287972 Query 19514 TGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATG 19573 |||||| |||| || | || ||||| || ||||| ||| || || | ||||| | Sbjct 287973 TGGCACTCGGATGTGTTTGAGTTCCTAGATCTGCGAAAGAATCATGGGAAGGAGGAAGTT 288032 Query 19574 CGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAG 19633 ||| ||| ||||||||| |||| | ||||| || || || |||||| || || || Sbjct 288033 CGCGCTCGTGACCTCTTCTTGGCCCTTTGGATCCCTGATCTCTTCATGAAGCGTGTCGAA 288092 Query 19634 AAGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTAC 19693 ||| ||| || ||| |||||||||||| | || ||||| ||||| | || |||||| Sbjct 288093 AAGAACGGCGAGTGGACGCTGATGTGCCCGAATGAGTGCCCCGGCCTTGCTGATGTCTAC 288152 Query 19694 GGCGAGGCGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTG 19753 || || | ||| | | | ||| || || | || |||| || | || | Sbjct 288153 GGTGATGAGTTTGAGGCTCTCTACGAAACGTATGAGGCTGAGGGTCGCGGCCGCCAGAAG 288212 Query 19754 GTCCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCG 19813 | ||| | | | ||||| | | ||||| || ||| || ||||||| || Sbjct 288213 ATAAAGGCTCAGAAGCTCTGGTATGCCATCCTCGAAGCTCAGACAGAAACCGGCAACCCC 288272 Query 19814 TACATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATC 19873 | |||| ||||||||| || || |||| || |||||||| | ||| | ||| Sbjct 288273 TTCATGCTCTACAAGGATCATGCCAATCGCAAGAGCAACCAGAAGAATTTAGGCACAATC 288332 Query 19874 AAGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTG 19933 ||||| || || || || ||||| ||| ||| || || || ||| || Sbjct 288333 CGCAGCTCCAATCTCTGCACCGAGATCATCGAGTATTCAGCCCCAGATGAAGTTGCTGTT 288392 Query 19934 TGTAATCTGGCGTCCCTGTGCCTGCCGACTTTCGTCAAGGCCTCCTC------CTTCGAC 19987 || || || || || || |||||| | ||||| | | | || || Sbjct 288393 TGCAACCTAGCATCTATGGCCCTGCCATCATTCGTGGATTATCACACAGAGAGCTATAAC 288452 Query 19988 TTTGCCAAATTGTAC--GAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCG 20045 || ||||| ||| ||||| || | || || || |||||||| ||||||| Sbjct 288453 TT--CCAAAAGCTACATGAGGTTACTCAAGTTGTTGTCCGCAATCTGAACAAGGTCATCG 288510 Query 20046 ATCGGAACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCG 20105 | ||| |||||| | ||| || || |||||||| ||||| || || | Sbjct 288511 ACGCAAACCATTACCCTGTTATTGAGGCACGTAACAGCAATATGCGTCACCGACCTATTG 288570 Query 20106 CGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATC 20165 | || ||||| || |||||||| ||| | ||| || | | || || ||| Sbjct 288571 GTCTTGGTGTCCAAGGTCTGGCCGATACCTTCCTCGCCCTCCGCATGCCTTTTGA--ATC 288628 Query 20166 -CCA-AGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCT 20223 ||| |||| || ||||||||||| ||||||||| | |||||||||| || | Sbjct 288629 ACCAGAGGCTCGGCAGCTCAACAAGCAGATCTTCGAGACTATGTACCACGCTGCTTTGAC 288688 Query 20224 GGAATCGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGC 20283 | ||| || | || |||| ||| || | || || | | |||| || || | Sbjct 288689 TGCATCAATGGAGATTGCTAAAGTGGAGGGTACTTATTCTACTTACGAGGGTTCACCTGT 288748 Query 20284 GTCCGAGGGTATCCTCCAGCCGGACATGTGGGGCGTCACTGAGAATGAGTTTTGGAGC-- 20341 ||| | || ||||||||| || ||||||| || || ||| ||||| | Sbjct 288749 TTCCCAAGGCATCCTCCAGTACGATATGTGGGATGTTACCCCCTCTGATCTTTGGGACTG 288808 Query 20342 ----GCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGT-TGCTCGTCGCGC 20396 || ||||| | |||||||| || || | ||||| | || | ||| | || | Sbjct 288809 GGCTGCTCTCAAAGAGCAGATCAAGCAGCATGGTGTACGCAA-TAGTCTTCTCATGGCTC 288867 Query 20397 CCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAG-GCTTTCGAGCCGTAC 20455 | ||||| || || ||| | |||||| |||| ||||||||| ||||| || || ||| Sbjct 288868 CTATGCCAACTGCTAGCACCTCGCAGATCTTGGGTAACAACGAGTGCTTT-GAACCTTAC 288926 Query 20456 ACGACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTC 20497 || | ||||| |||| ||||| |||| || |||||| Sbjct 288927 ACTTCAAACATTTACTCTCGTCGCGTCTTGGCAGGCGAGTTC 288968 >seq37 Length=418716 Score = 149 bits (164), Expect = 7e-31 Identities = 342/502 (68%), Gaps = 25/502 (5%) Strand=Plus/Plus Query 59931 AAAGCAGAATGGGCCATGCAGTGGATGAGTCCTGG-AGCATCA--TTTGCACAACGTCTC 59987 || || || |||||| || ||||||| || | | | | || ||||| || || | Sbjct 51357 AAGGCTGACTGGGCCCTGAAGTGGATTAGCGATCGCAACTCCACCTTTGCCCAGCGCTTG 51416 Query 59988 ATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGG 60047 || || ||||| ||||| || ||||||||| ||| | ||| |||| |||||| Sbjct 51417 ATTGCCTTTGCCGCTGTGGAGGGTATCTTCTTCAGTGGTGCTTTCGCATCTATCTTCTGG 51476 Query 60048 CTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGAC 60107 ||||| |||||||| || ||||| ||||||| ||||||||||||||| || ||||| ||| Sbjct 51477 CTCAAGAAGCGTGGTCTGATGCCTGGCCTGACTTTCTCCAACGAGCTCATCTCCCGTGAC 51536 Query 60108 GAGGGCCTCCATCAGGAGTTTGCAGTGAC-GCTCTATTCACACCTATTGGAAAAATGCCC 60166 ||||| || ||| || ||||| || | ||| | || |||| || | || | || Sbjct 51537 GAGGGTCTTCATACCGACTTTGC-CTGCCTGCTGTTCTCTCACC---TGAAGAACCGACC 51592 Query 60167 TTCCAAGGATATTCACAAGATTGT--TCAGTGG--GCTTGTGAAG-TGGAGAGCGAGTTC 60221 ||||| | || || || || | || || ||| | ||| |||||| Sbjct 51593 CAGTAAGGAGGTCGTGGAGGCGGTCATC-GTCGATGC-CGTCAAGATTGAGCAAGAGTTC 51650 Query 60222 ATCACAGAAGCGCTTCCATGCAAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTAC 60281 | ||||| ||||| || ||| || | || ||| |||| |||| ||| ||| Sbjct 51651 CTGACAGAGGCGCTGCCGTGCGCTCTGCTCGGCATGAACGCCAACCTGATGAAGCAATAC 51710 Query 60282 ATTCAGTTTGTCGCGGACCG---CCTCATGGCCC--AGTTTGGAGAAGGACCAATTTACG 60336 || ||||||| || ||||| ||| | || | || ||||||| | ||| Sbjct 51711 ATCGAGTTTGTTGCTGACCGTCTGCTCGTCGCTCTGGGTAATGAGAAGG-----TCTACC 51765 Query 60337 GCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCT 60396 || ||||| ||||||| ||||||| ||||||| | | || ||||||||||||| Sbjct 51766 GCTCTTCCAACCCGTTCGACTTCATGGAGAACATCTCGCTCGGTGGCAAGACCAACTTCT 51825 Query 60397 TTGAGAAGCGGGTCGGGGATTA 60418 |||||||||| ||||| ||||| Sbjct 51826 TTGAGAAGCGCGTCGGTGATTA 51847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523161282160