Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq95 136 3e-27 >seq95 Length=111136 Score = 136 bits (150), Expect = 3e-27 Identities = 156/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 29609 GTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGG 29668 || ||||| || | ||||||| ||||||||| ||| | |||| || || |||||| | Sbjct 11741 GTCGGAAACGGCCGCGGCTCCCGCTCGAGCTGTATCTTAAGCGCATCGACATGGTCACAG 11800 Query 29669 TAGACGTGAGCATCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTG 29727 || ||||| |||||||||| | ||| | ||| || || || | ||| | |||||| Sbjct 11801 TACACGTGGGCATCTCCCATGACGTGCGTCAAGCTG-CCGGGGACCAGCTCACAGACGTG 11859 Query 29728 AGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCAT 29787 || ||||||| || || || | ||||||||||||||| |||||||| ||||| ||||| Sbjct 11860 CGCGATCATGTGAGTAAGTAGCGCGTAGCTGGCGATGTTGAAGGGCACGCCGAGACCCAT 11919 Query 29788 GTCCCCTGACCTCTGGTAGAGCTGGCA 29814 ||| | |||| ||| || ||||| || Sbjct 11920 GTCGCAAGACCGCTGATACAGCTGACA 11946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406162016922754