Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq37 96.9 3e-15 >seq37 Length=418716 Score = 96.9 bits (106), Expect = 3e-15 Identities = 194/287 (68%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 4809 GGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATA 4868 || |||| || || ||||| || || || || | ||||| || || || || || Sbjct 51247 GGCTCTTTGATGTAGGTGTCAATAAGAAGAGAGTATGTCTCAGAGTGAATGTTCTCCATC 51188 Query 4869 GCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTT 4928 ||||| || ||||||||||| | ||| || | | ||||| ||| || ||| | Sbjct 51187 ATGATCTGGAAGCCGTAAAAGCACCGAGCCTCGGGGATCTGAACCTCGCCACTAAAACGC 51128 Query 4929 TCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGAT 4988 || || | ||| ||||| || || || ||| ||| ||||| || |||| | ||||| Sbjct 51127 TCCACAAGGTTCTCGTTGACAATGCCATCAGAGGCGGCAAAGAAGGCCAGGATGTGAGAG 51068 Query 4989 ATAAAGTA---CTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAA 5045 ||||| || || || ||| | | || ||||||| | ||| ||| || | | Sbjct 51067 ATAAAATATTTCTCATCCTCATTGATTCGGTTGTTCCAGTCGTGCATATCCTTGGAGAGG 51008 Query 5046 TCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACAT 5092 |||| || ||| ||||||| || || ||||| || || |||||||| Sbjct 51007 TCAATCTCCTCAGCAGTCCAGAAGGAGGCTTCAGCCTTCTTGTACAT 50961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427048356084587