Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq95 123 2e-23 >seq95 Length=111136 Score = 123 bits (136), Expect = 2e-23 Identities = 153/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 27103 GTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGG 27162 || ||||| || | ||||||| ||||||||| |||| |||| || || || || | Sbjct 11741 GTCGGAAACGGCCGCGGCTCCCGCTCGAGCTGTATCTTAAGCGCATCGACATGGTCACAG 11800 Query 27163 TAGACGTGAGCGTCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTG 27221 || ||||| || ||||||| | ||| | ||| || || || | ||| | |||||| Sbjct 11801 TACACGTGGGCATCTCCCATGACGTGCGTCAAGCTG-CCGGGGACCAGCTCACAGACGTG 11859 Query 27222 AGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCAT 27281 || ||||||| || || || | ||||||||||||||| ||||| || ||||| ||||| Sbjct 11860 CGCGATCATGTGAGTAAGTAGCGCGTAGCTGGCGATGTTGAAGGGCACGCCGAGACCCAT 11919 Query 27282 GTCCCCCGACCTCTGGTAGAGCTGACA 27308 ||| | |||| ||| || |||||||| Sbjct 11920 GTCGCAAGACCGCTGATACAGCTGACA 11946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506123694809