Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq13 370 1e-97 seq37 86.0 9e-12 >seq13 Length=863668 Score = 370 bits (410), Expect = 1e-97 Identities = 1225/1880 (65%), Gaps = 51/1880 (3%) Strand=Plus/Minus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 ||||| ||||| || || |||| | ||| || || |||||||| || || || ||| Sbjct 289318 GTAAATTGAATAGGTTGAGCAGCGGCCTGTGTTCGGAGGTAGTACATGCCGGTCTTCAGA 289259 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 || || |||| || ||| ||||||||||| | |||| |||| || || Sbjct 289258 CCGAGTTTCCACCCAGCGAAGTGCATGCTTGTGATTTTGCCCATGGTAGGCTCTCTCATG 289199 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 || ||||| | |||||| ||||| || || || || | |||||| ||||||| | | Sbjct 289198 TGGATATTGAGAGACTGAGACTGATCAATAAATGCACCACGATCAGCAGCCATTTGGACA 289139 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021 | || || | ||| ||||| | |||||| | | | |||| ||| || | Sbjct 289138 ACTGTGCGCTGGGAAATCTCCCAGACGGTTTTGTATAGTGCCTTGACCTCAGTGGGTATA 289079 Query 77022 TTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078 | | |||| || |||||||| || | ||||| |||||| |||| ||| | Sbjct 289078 CTAGGAATATTCTGGATGGAACCGTTTTCGGCAATAATACGATTCTTCATATTGTCAGAC 289019 Query 77079 CACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCA 77138 |||| | | || || | | | || || ||||| || | || || || || Sbjct 289018 CACAGTCCCAAATCCACTAGATCCTTGAGTAGCCAGGGATTGACGACCTGGAACTCGCCT 288959 Query 77139 GACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 77198 | ||| || | ||||| |||||| || || || ||||| | | || ||||| ||| Sbjct 288958 GCCAAGACGCGACGAGAGTAAATGTTTGAAGTGTAAGGTTCAAAGCACTCGTTGTTACCC 288899 Query 77199 AAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 77258 || || || | || ||||||||||||||| |||| | | |||||| | | |||| Sbjct 288898 AAGATCTGCGAGGTGCTAGCAGTTGGCATAGGAGCCATGAGAAGACTATTGCGTACACCA 288839 Query 77259 TG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATC 77317 || || | |||| | ||||| ||| ||| ||||||||||| || || |||||| Sbjct 288838 TGCTGCT-TGATCTGCTCTTTGAGAGCAGCCCAGTCCCAAAGATCAGAGGGGGTAACATC 288780 Query 77318 CCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGG 77377 ||| | |||||| || || || || | | || ||| || | || || ||||| Sbjct 288779 CCACATATCGTACTGGAGGATGCCTTGGGAAACAGGTGAACCCTCGTAAGTAGAATAAGT 288720 Query 77378 TCCTTCTGTTTCAGCTAGTTCACAACTC--GCTTCCAATGCTCCGTAATAAATTGTTTCG 77435 || || || ||| | || | | | || ||| || ||| || || || ||| Sbjct 288719 ACCCTCCACTTTAGCAA--TCTCCATTGATGCAGTCAAAGCAGCGTGGTACATAGTCTCG 288662 Query 77436 AAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATA 77495 || |||| ||| ||||| | | || || ||||| || ||| | | | Sbjct 288661 AAGATCTGCTTGTTGAGCTGCCGAGCCTCTGGTGATTCAAAAGGC--ATGCGGAGGGCGA 288604 Query 77496 --AAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAA 77553 |||| ||| || | || || || |||| ||||||||||| || | | ||||| Sbjct 288603 GGAAGGTATCGGCCAGACCTTGGACACCAAGACCAATAGGTCGGTGACGCATATTGC--- 288547 Query 77554 TTTTA---GCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAA 77610 | ||| || || || ||| |||| || ||| || | || || ||||| | | Sbjct 288546 TGTTACGTGCCTCAATAACAGGGTAATGGTTTGCGTCGATGACCTTGTTCAGATTGCGGA 288487 Query 77611 CAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCT-TCCATCT-ATAACAAA 77668 |||| |||| | || || | ||| || | || | | | || || | | |||| | Sbjct 288486 CAACAACTTGAGTAACCTCATGTAGCTTTTGGAAGTTATAGCTCTCTGTGTGATAATCCA 288427 Query 77669 C--ATGTT--CAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCAT 77724 | ||| | || || ||||||||||| || ||||| || || |||| | | | || Sbjct 288426 CGAATGATGGCAGGGCCATAGATGCTAGGTTGCAAACAGCAACTTCATCTGGGGCTGAAT 288367 Query 77725 ATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGC 77784 | | || |||||||| || ||||| | ||| ||||| | ||| | ||||||| Sbjct 288366 ACTCGATGATCTCGGTGCAGAGATTGGAGCTGCGGATTGTGCCTAAATTCTTCTGGTTGC 288307 Query 77785 TCTTTTTATTG-CATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGAT 77843 |||| |||| ||||| ||||| || || || || || | |||||||| |||| | | Sbjct 288306 TCTTGCGATTGGCATGA-TCCTTGTAGAGCATGAAGGGGTTGCCGGTTTCTGTCTGAGCT 288248 Query 77844 TCGATAATAGATTTCCAGACGACTCT-AGCTTTTATCATAGATTTGTATCGCCTCTCTCT 77902 |||| || | | ||||| | ||| ||| |||||| | | || | ||| Sbjct 288247 TCGAGGATGGCATACCAGA-GCTTCTGAGCCTTTATCTTCTGGCGGCCGCGACCCTCAGC 288189 Query 77903 TTCATA--TTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGG 77960 ||||| || ||| | |||| ||||| ||||| || | |||||| | | || ||| Sbjct 288188 CTCATACGTTTCGTAGAGAGCC--TCAAACTCATCACCGTAGACATCAGCAAGGCCGGGG 288131 Query 77961 CATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGA 78020 || ||||| |||||||||| | ||| || || | | | || || ||||| |||||| Sbjct 288130 CACTCATTCGGGCACATCAGCGTCCACTCGCCGTTCTTTTCGACACGCTTCATGAAGAGA 288071 Query 78021 TCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTC 78080 ||||| ||||| || || | || || || || | | | ||| || || || |||| Sbjct 288070 TCAGGGATCCAAAGGGCCAAGAAGAGGTCACGAGCGCGAACTTCCTCCTTCCCATGATTC 288011 Query 78081 TTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATA 78140 ||| ||||| || ||||| | | ||| || ||||||||||| ||||| || || | Sbjct 288010 TTTCGCAGATCTAGGAACTCAAACACATCCGAGTGCCATGGTTCAAGATAGATGGCGAAG 287951 Query 78141 ACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTC 78200 | ||||| || || ||||| || ||||| | || | || |||||||| | || | | Sbjct 287950 GCGCCAGGCCGCTTGTTACCACCTTGATCGACGTAACGAGCCGTGTTATTGAAGACACGC 287891 Query 78201 AACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCG 78260 | ||| |||| ||||||||||||||| || || ||||||| || ||| || | || Sbjct 287890 AGCATGGGAACAATACCGTTAGATGTACCGTTAGTTCCAGCGATGTAAGAGCCCGTGGCA 287831 Query 78261 CGAAT---ATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAA 78317 || || | | | || | || || ||||| |||||||| || || | ||| || Sbjct 287830 CGGATGCGGTGAACATTG---AGGCCAATGCCTCCAGCCATCTTTGAAATCATAGCACAT 287774 Query 78318 CGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAG 78377 ||||| ||||| || || ||||| || || || ||| |||||| | | ||||| Sbjct 287773 GTCTTCAAGGTATCATAAATTCCCTCGATGCTATCGTCCTTCATGTCGACTAAGAAACAA 287714 Query 78378 CTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAAC 78437 ||||| || | || ||||| ||||| || | ||||||||| ||||| || || Sbjct 287713 GACGACATCTGGGGTTGCGGTGTTCCGGCATTGAAGAGTGTCGGAGAAGCATGGGTGAAG 287654 Query 78438 CATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC----CCATTGATG 78493 |||| || | || ||||| || || | | || ||||| || |||| Sbjct 287653 AATTTAAGGGACATGAGGTTGTAGGTCTCGAGGACCCTCTCGATGTCGTCTCCCCAGATG 287594 Query 78494 AATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTAT 78553 || ||||| || ||||| | ||| ||||||||||| ||||| |||| || || Sbjct 287593 ----CCGACCGCCACGCGCATGATCATGTGCTGAGGTCTCTCAACAATCTTGCCGTTGAT 287538 Query 78554 TTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCT 78611 ||| | | ||| || ||||| || || || |||||||| | ||| ||||| || Sbjct 287537 TTTGAGAAGGTAGGACCGCTCCAACGTCTTGAAGCCAAAATATTGGTAGTTGAAA--TCG 287480 Query 78612 CTCTCGTAAATAATAACAGA 78631 | ||||| | ||| |||| Sbjct 287479 CGGTCGTATACAATGGCAGA 287460 >seq37 Length=418716 Score = 86.0 bits (94), Expect = 9e-12 Identities = 195/293 (67%), Gaps = 3/293 (1%) Strand=Plus/Minus Query 48402 TCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCC 48461 ||||| | ||| || || || | |||| || | || |||||||| || || || Sbjct 51244 TCTTTGATGTAGGTGTCAATAAGAAGAGAGTATGTCTCAGAGTGAATGTTCTCCATCATG 51185 Query 48462 ATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCA 48521 ||||| || |||||||| || | || || | |||||| ||||| || ||| || || Sbjct 51184 ATCTGGAAGCCGTAAAAGCACCGAGCCTCGGGGATCTGAACCTCGCCACTAAAACGCTCC 51125 Query 48522 GCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATA 48581 | | ||||| || || || |||||| || ||||| || || | | || ||| Sbjct 51124 ACAAGGTTCTCGTTGACAATGCCATCAGAGGCGGCAAAGAAGGCCAGGATGTGAGAGATA 51065 Query 48582 AAATATTTTTCGTTGGAAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATATATCT 48638 |||||||| || | | | | | || |||||||| | ||||| || || | || Sbjct 51064 AAATATTTCTCATCCTCATTGATTCGGTTGTTCCAGTCGTGCATATCCTTGGAGAGGTCA 51005 Query 48639 ACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 | || ||||| ||||| || || || || || || || ||||| | ||| || Sbjct 51004 ATCTCCTCAGCAGTCCAGAAGGAGGCTTCAGCCTTCTTGTACATTTGCCAGAT 50952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694666724676960