Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq13 322 7e-83 seq37 93.3 6e-14 >seq13 Length=863668 Score = 322 bits (356), Expect = 7e-83 Identities = 1175/1820 (65%), Gaps = 37/1820 (2%) Strand=Plus/Minus Query 75406 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 75465 ||| || || |||||||| || || || ||||| || |||| || ||| |||||||| Sbjct 289289 TGTTCGGAGGTAGTACATGCCGGTCTTCAGACCGAGTTTCCACCCAGCGAAGTGCATGCT 289230 Query 75466 TGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGAT 75525 ||| | |||| | || || || || ||||| | |||||| ||||| || Sbjct 289229 TGTGATTTTGCCCATGGTAGGCTCTCTCATGTGGATATTGAGAGACTGAGACTGATCAAT 289170 Query 75526 GAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGT 75585 || || || | |||||| ||||||| | || || || | ||| ||||| | || Sbjct 289169 AAATGCACCACGATCAGCAGCCATTTGGACAACTGTGCGCTGGGAAATCTCCCAGACGGT 289110 Query 75586 TTTGAAAACTTGTTTGATATCATCTGGAAGATTTG---TATTTTGAATGGATCCGCCATC 75642 |||| | | | |||| ||| || | | | | |||| || ||||| ||| || Sbjct 289109 TTTGTATAGTGCCTTGACCTCAGTGGGTATACTAGGAATATTCTGGATGGAACCGTTTTC 289050 Query 75643 AGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAG 75702 | ||||| |||||| || | ||| ||||| | || || | | | || Sbjct 289049 GGCAATAATACGATTCTTCATATTGTCAGACCACAGTCCCAAATCCACTAGATCCTTGAG 288990 Query 75703 GAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACT 75762 || ||||| || | || || || || | ||| || | |||| |||||| || Sbjct 288989 TAGCCAGGGATTGACGACCTGGAACTCGCCTGCCAAGACGCGACGAGAGTAAATGTTTGA 288930 Query 75763 GGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCAT 75822 || || ||||| | | || ||||| ||||| || || | || |||||| ||||| Sbjct 288929 AGTGTAAGGTTCAAAGCACTCGTTGTTACCCAAGATCTGCGAGGTGCTAGCAGTTGGCAT 288870 Query 75823 AGGTGCCACCAATAAACTATTTCTGAGACCATG-TGTTCTGATTTTATCTTTTAGATATT 75881 ||| |||| | | |||||| | | |||||| || | |||| | ||||| ||| Sbjct 288869 AGGAGCCATGAGAAGACTATTGCGTACACCATGCTGCT-TGATCTGCTCTTTGAGAGCAG 288811 Query 75882 TCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGC 75941 ||| ||||||||||| || || ||||||||| | |||||| || || || || | | Sbjct 288810 CCCAGTCCCAAAGATCAGAGGGGGTAACATCCCACATATCGTACTGGAGGATGCCTTGGG 288751 Query 75942 TAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTC- 76000 | || ||| || | || || ||||| || ||| || ||| | || | | | Sbjct 288750 AAACAGGTGAACCCTCGTAAGTAGAATAAGTACCCTCCACTTTAGCAA--TCTCCATTGA 288693 Query 76001 -GCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTC 76059 || || ||| ||| || || || ||||| |||| ||| || || | | || || Sbjct 288692 TGCAGTCAAAGCAGCGTGGTACATAGTCTCGAAGATCTGCTTGTTGAGCTGCCGAGCCTC 288633 Query 76060 AAGACTATCAAAAGGATAATGTAAAAGAATA--AATGCATCTGCTAGTCCCTGAACTCCA 76117 | |||||||| ||| | | | || | ||| || || || || || ||| Sbjct 288632 TGGTGATTCAAAAGGC--ATGCGGAGGGCGAGGAAGGTATCGGCCAGACCTTGGACACCA 288575 Query 76118 ATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTA 76177 | ||||||||||| || | | ||||| | || || || |||||||| || Sbjct 288574 AGACCAATAGGTCGGTGACGCATATTGCTGTTACGTGCCTCAATAACAGGGTAATGGTTT 288515 Query 76178 ATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGA 76237 || || | || || ||||| | |||||| |||| | || || | ||| || | Sbjct 288514 GCGTCGATGACCTTGTTCAGATTGCGGACAACAACTTGAGTAACCTCATGTAGCTTTTGG 288455 Query 76238 AAATCAAATTT-TCCATCT-ATCACAAACATATTA----AGAGCTATAGATGCTAGATTA 76291 || | | | | || | | || | || || | || || ||||||||||| || Sbjct 288454 AAGTTATAGCTCTCTGTGTGATAATCCACGAATGATGGCAGGGCCATAGATGCTAGGTTG 288395 Query 76292 CAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACAC 76351 ||||| || || |||| | | ||| | || ||||| ||||| ||||| | Sbjct 288394 CAAACAGCAACTTCATCTGGGGCTGAATACTCGATGATCTCGGTGCAGAGATTGGAGCTG 288335 Query 76352 TTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTA-CATGAGTCCTTATAAAGAAC 76410 ||| || || | ||| | ||||||||||| || ||||| ||||| || || | Sbjct 288334 CGGATTGTGCCTAAATTCTTCTGGTTGCTCTTGCGATTGGCATGA-TCCTTGTAGAGCAT 288276 Query 76411 AAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTT 76469 || || | || ||||| |||| | ||||| || | | ||||| | ||| ||| | Sbjct 288275 GAAGGGGTTGCCGGTTTCTGTCTGAGCTTCGAGGATGGCATACCAGA-GCTTCTGAGCCT 288217 Query 76470 TTATTATAGATTTGTATCGCTTCTCTCTTTCATA--TTGTGTATATAACCGTTCAAATTC 76527 |||| | | || ||| ||||| || ||| | | || ||||| || Sbjct 288216 TTATCTTCTGGCGGCCGCGACCCTCAGCCTCATACGTTTCGTAGAGAGCC--TCAAACTC 288159 Query 76528 ATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACC 76587 ||| || | |||||| | | || || || |||||||| ||||||| | |||||| || Sbjct 288158 ATCACCGTAGACATCAGCAAGGCCGGGGCACTCATTCGGGCACATCAGCGTCCACTCGCC 288099 Query 76588 ATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCG 76647 | | | || || ||||| ||||||||||| ||||| || || | || || || || Sbjct 288098 GTTCTTTTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGGGCCAAGAAGAGGTCACG 288039 Query 76648 GGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGA 76707 | | | ||| || || || ||||||| |||||||||||||| | | ||| || Sbjct 288038 AGCGCGAACTTCCTCCTTCCCATGATTCTTTCGCAGATCTAGGAACTCAAACACATCCGA 287979 Query 76708 ATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTAT 76767 ||||||||||| ||||| || || | | || || || || ||||| || ||||| | Sbjct 287978 GTGCCATGGTTCAAGATAGATGGCGAAGGCGCCAGGCCGCTTGTTACCACCTTGATCGAC 287919 Query 76768 ATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATT 76827 || | || |||||||| | || | || ||| |||| ||| |||||||||||||| || Sbjct 287918 GTAACGAGCCGTGTTATTGAAGACACGCAGCATGGGAACAATACCGTTAGATGTACCGTT 287859 Query 76828 TGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCC 76887 ||||||| || ||| || ||||| || || | ||||| || ||||| Sbjct 287858 AGTTCCAGCGATGTAAGAGCCCGTGGCACGGATGCGGTGAACATTGAGGCCAATGCCTCC 287799 Query 76888 TGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATC 76947 ||||| || || || | |||||| ||||| || ||||| || ||||| || ||||| Sbjct 287798 AGCCATCTTTGAAATCATAGCACATGTCTTCAAGGTATCATAAATTCCCTCGATGCTATC 287739 Query 76948 ATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAA 77007 ||| |||||| | | ||||| ||||| || | || ||||| ||||| || Sbjct 287738 GTCCTTCATGTCGACTAAGAAACAAGACGACATCTGGGGTTGCGGTGTTCCGGCATTGAA 287679 Query 77008 CAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAAC 77067 | ||| ||||| ||||| ||||| |||| || | || ||||| || || | || Sbjct 287678 GAGTGTCGGAGAAGCATGGGTGAAGAATTTAAGGGACATGAGGTTGTAGGTCTCGAGGAC 287619 Query 77068 TGCTTCTATATC----CCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAG 77123 || || || || |||| || || || || ||||| | ||| ||||||| Sbjct 287618 CCTCTCGATGTCGTCTCCCCAGATG----CCGACCGCCACGCGCATGATCATGTGCTGAG 287563 Query 77124 GTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAAC 77183 ||| || ||| |||| || ||||| | | ||| || ||||| || || || | Sbjct 287562 GTCTCTCAACAATCTTGCCGTTGATTTTGAGAAGGTAGGACCGCTCCAACGTCTTGAAGC 287503 Query 77184 CAAAATAGTTGTA--TGAAA 77201 ||||||| | ||| ||||| Sbjct 287502 CAAAATATTGGTAGTTGAAA 287483 >seq37 Length=418716 Score = 93.3 bits (102), Expect = 6e-14 Identities = 199/294 (68%), Gaps = 5/294 (2%) Strand=Plus/Minus Query 46891 TCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCC 46950 ||||| | || || || || | |||| || | || || |||||||| || || Sbjct 51244 TCTTTGATGTAGGTGTCAATAAGAAGAGAGTATGTCTCAGAGTGAATGTTCTCCATCATG 51185 Query 46951 ATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCA 47010 ||||| || |||||||| || | || || | ||||| ||||| || ||| || || Sbjct 51184 ATCTGGAAGCCGTAAAAGCACCGAGCCTCGGGGATCTGAACCTCGCCACTAAAACGCTCC 51125 Query 47011 GACAAA-TTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAAT 47069 |||| ||||| || || || |||||| || ||||| || |||| | || || Sbjct 51124 -ACAAGGTTCTCGTTGACAATGCCATCAGAGGCGGCAAAGAAGGCCAGGATGTGAGAGAT 51066 Query 47070 AAAATATTTTTCATCGGTAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATATATC 47126 ||||||||| ||||| | | | | || |||||||| | ||||| || || | || Sbjct 51065 AAAATATTTCTCATCCTCATTGATTCGGTTGTTCCAGTCGTGCATATCCTTGGAGAGGTC 51006 Query 47127 TACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATAT 47180 | || ||||| |||||||| || || || || || || ||||| | ||| || Sbjct 51005 AATCTCCTCAGCAGTCCAGAAGGAGGCTTCAGCCTTCTTGTACATTTGCCAGAT 50952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712932270108480