Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12- 31] 7,345 sequences; 40,250,382 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq4745 87.8 2e-12 >seq4745 Length=15183 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || ||||||||||| || ||| |||| ||||| ||||| ||||| || || Sbjct 9305 ATGTATGTATCGATGAGAAGCGAGTATGTTTCCGAGTGGATGTTTTCCATCATGATTTGG 9364 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| |||||||| ||||||| ||||| || || | ||| ||||| | || Sbjct 9365 AAACCGTAGAAGCATCGTGCTTCCGGAATTTGTACCTCTCCACTGAAGCGTTCGACAAGG 9424 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 ||||| || || || || ||| |||||||| || || Sbjct 9425 TTTTCATTGACAATTCCATCGGATGCGGCGAAGAATGC 9462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517498082844600