Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12-
31] 7,345 sequences; 40,250,382 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq4745 87.8 2e-12
>seq4745
Length=15183
Score = 87.8 bits (96), Expect = 2e-12
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| || ||||||||||| || ||| |||| ||||| ||||| ||||| || ||
Sbjct 9305 ATGTATGTATCGATGAGAAGCGAGTATGTTTCCGAGTGGATGTTTTCCATCATGATTTGG 9364
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|| ||||| |||||||| ||||||| ||||| || || | ||| ||||| | ||
Sbjct 9365 AAACCGTAGAAGCATCGTGCTTCCGGAATTTGTACCTCTCCACTGAAGCGTTCGACAAGG 9424
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391
||||| || || || || ||| |||||||| || ||
Sbjct 9425 TTTTCATTGACAATTCCATCGGATGCGGCGAAGAATGC 9462
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517498082844600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |