Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12-
31] 7,345 sequences; 40,250,382 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq894 116 3e-21
>seq894
Length=6424
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||||| ||||||||||| ||||||||||| || || | | | || |||
Sbjct 3229 ACCAAGTGCAAGGTGCTCTCCTTTTGAATGTTGTAATCCGAAAGAGTTCTACCATCCTCC 3288
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
| ||| ||||| ||||| ||||| || ||||||||||| || | |||||||||||
Sbjct 3289 AATTGCTTTCCAGCGAAAATCAATCGTTGTTGGTCGGGTGGGATGCCCTCCTTGTCTTGG 3348
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| ||| ||| || | | | | || |||||||| | ||||| |||||
Sbjct 3349 ATCTTTGTCTTGACGTTATCAATGGTATCTGACGATTCCACCTCTAACGTAATTGTCTTT 3408
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| |||| |||||| ||||||||||||||
Sbjct 3409 CCAGTCAAAGTCTTAACAAAGATTTGCAT 3437
Score = 86.0 bits (94), Expect = 5e-12
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| |||||||||||| ||| ||| | || || ||||| || || || ||
Sbjct 3986 CTCCTTCTGGATGTTGTAGTCGCTCAAAGTACGACCATCCTCGAGTTGCTTGCCAGCAAA 4045
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
||||| ||||||||||| ||||| | ||||||||| |||
Sbjct 4046 GATCAAACGCTGTTGGTCAGGAGGAATACCCTCCTTATCC 4085
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395039833979245
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |