Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12-
31] 7,345 sequences; 40,250,382 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq4745 129 1e-24
>seq4745
Length=15183
Score = 129 bits (142), Expect = 1e-24
Identities = 164/225 (73%), Gaps = 3/225 (1%)
Strand=Plus/Minus
Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGAT---TTGGC 101907
||| |||||||||| | |||||| ||| ||||| | || ||| | || ||
Sbjct 9197 CATTAAGAAGAAGGCCGACTGGGCTGTTAGATGGATTGAGGATAAGAACTCTACCTTTGC 9138
Query 101908 GGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967
||| | || || || ||||| |||||||| |||||||| |||||| | ||||| ||
Sbjct 9137 TCAACGTCTCGTCGCATTCGCTGCCGTTGAAGGTATCTTCTTCAGTGGTTCCTTCGCCTC 9078
Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027
||||||||| ||||||| | || | || |||||||||||| ||||| ||| ||||
Sbjct 9077 TATTTTCTGGCTCAAGAAGCGTGGCTTGATGGCTGGTCTCACCTTTTCCAACGAGCTCAT 9018
Query 102028 TTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072
|| | ||||| ||||||||| |||||| || ||| |||| ||
Sbjct 9017 CTCCCGTGACGAGGGTCTTCATACCGACTTCGCCTGCCTGCTCTT 8973
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989490872414475
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |