Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12-
31] 7,345 sequences; 40,250,382 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq5771 84.2 2e-11
>seq5771
Length=11851
Score = 84.2 bits (92), Expect = 2e-11
Identities = 140/197 (71%), Gaps = 4/197 (2%)
Strand=Plus/Plus
Query 139577 TTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGAT 139635
||||| ||||||||||| || |||| || | || || || || || ||||| ||||
Sbjct 7519 TTTTGGATGTTATAATCAGACAAAGTGCGTCCA-TCCTCAAGTTGCTTTCCAGCGAAGAT 7577
Query 139636 CAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTGTT 139694
|| |||||| ||||| || || || || || ||||| ||| | || || || | | |
Sbjct 7578 CAAACGTTGTTGATCCGGGGGAATTCCCTCCTTGTC-TTGAATCTTGGTCTTGACATTGT 7636
Query 139695 CCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGA 139754
| | ||||||| || || ||||||| ||| | ||||| || ||||| || || ||||
Sbjct 7637 CGATGGTGTCGGAGGATTCGACCTCAAGGGTGATGGTCTTACCCGTCAAGGTCTTGACGA 7696
Query 139755 ATATTTGCATAGCTTAT 139771
| | |||| | ||||
Sbjct 7697 AGCTATGCAAATATTAT 7713
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496018455124000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |