Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12-
31] 7,345 sequences; 40,250,382 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq4745 93.3 4e-14
>seq4745
Length=15183
Score = 93.3 bits (102), Expect = 4e-14
Identities = 207/303 (68%), Gaps = 11/303 (4%)
Strand=Plus/Plus
Query 14097 GTTTCAATAGCATTAAATAAATATTCCTTCTCT--TTAGTACTTGAAATGTATGTATCAA 14154
|| ||||||||||| || | |||| ||| | || | ||||| |||||||||| |
Sbjct 9260 GTATCAATAGCATTGAAGAGATATGTCTTTTGAGCTTGTTCCTTGA--TGTATGTATCGA 9317
Query 14155 TAAGTAAGCTA-TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAG 14213
| || |||| | || |||| ||||| ||||||||||| || || ||||| || |||
Sbjct 9318 TGAG-AAGCGAGTATGTTTCCGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAG 9376
Query 14214 CATCTAGCTTCCGACCATTGTACTTC-CGAGTAAAATCTTTCGGCCAAATTTTCATTAAC 14272
|||| ||||||| |||||| || | | | || | |||| | | |||||||| ||
Sbjct 9377 CATCGTGCTTCCGGAATTTGTACCTCTCCACT-GAAGCGTTCGACAAGGTTTTCATTGAC 9435
Query 14273 TATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATT 14332
|| ||||| || || || ||||| | | || || ||||| |||| || |
Sbjct 9436 AATTCCATCGGATGCGGCGAAGAATGCGAGAACGTGAGAGATGAAGTAACGCTCATCGTC 9495
Query 14333 GTTGAGT---TTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCA 14389
|||||| || ||||| ||| | |||||| || | ||| | ||| || | |||||
Sbjct 9496 ATTGAGTCTGTTGTTCCAGTCGTGAAGATCCTTTGACAAATCGATTTCCTCTGCGGTCCA 9555
Query 14390 AAA 14392
||
Sbjct 9556 GAA 9558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479683954973000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |