Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12-
31] 7,345 sequences; 40,250,382 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq894 93.3 3e-14
>seq894
Length=6424
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941
||| ||||| || | | |||||| || | |||||||||||||| | |||||||| ||
Sbjct 3210 GCCACCACGGAGACGAAGCACCAAGTGCAAGGTGCTCTCCTTTTGAATGTTGTAATCCGA 3269
Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001
| || | | || |||||||| || || || ||||||||||| ||||| |||| ||
Sbjct 3270 AAGAGTTCTACCATCCTCCAATTGCTTTCCAGCGAAAATCAATCGTTGTTGGTCGGGTGG 3329
Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061
| || || || || |||| ||||| | ||| || || | || ||
Sbjct 3330 GATGCCCTCCTTGTCTTGGATCTTTGTCTTGACGTTATCAATGGTATCTGACGATTCCAC 3389
Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110
|||| ||| || || ||||| || | ||| || ||||| |||||||||
Sbjct 3390 CTCTAACGTAATTGTCTTTCCAGTCAAAGTCTTAACAAAGATTTGCATT 3438
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381335460866010
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |