Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12-
31] 7,345 sequences; 40,250,382 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq894 93.3 3e-14
>seq894
Length=6424
Score = 93.3 bits (102), Expect = 3e-14
Identities = 150/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||| | || ||||||||||| ||||||||||| | || ||| | | |||
Sbjct 3454 AGAACCAAATGTAAAGTCGACTCCTTTTGAATGTTGTAGTCCGACAGGGTACGGCCATCC 3513
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
||||| || || || || | || || || ||||| || || | ||| || |||||
Sbjct 3514 TCCAACTGCTTACCAGCGAAGATGAGACGTTGTTGATCAGGTGGAATGCCTTCCTTGTCT 3573
Query 16844 GCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902
||| ||||| ||| || | | | | ||| || | ||| |||| ||||| ||
Sbjct 3574 TGAATCTTGCT-CTTTACGTTGTCGATAGTATCAGATGACTCAACCTCCAAAGTGATTGT 3632
Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||||||| || || ||||| |||||||||||
Sbjct 3633 CTTTCCGGTAAGAGTCTTGACGAAAATCTGCAT 3665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405051737661550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |