Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12-
31] 7,345 sequences; 40,250,382 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq4745 91.5 3e-13
>seq4745
Length=15183
Score = 91.5 bits (100), Expect = 3e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 243544 GACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAA 243603
|| ||| ||||||| || ||||||||||||| || | ||| || ||||| ||
Sbjct 8887 GAAGCTCTTCCATGTGCTCTCCTTGGCATGAACTCGGATTTGATGAAGCAATACATTGAG 8828
Query 243604 TTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAAC 243663
||||| || ||||| || | | || |||||| ||||||| || ||| || ||
Sbjct 8827 TTCGTCGCAGACCGTCTTCTTGTTGCTCTTGGTAATGAGAAGGTTTACCGATCAGCCAAT 8768
Query 243664 CCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGT 243723
|| || | ||| ||||| |||||| || ||| || || ||||||||||| |||||
Sbjct 8767 CCATTCGACTTCATGGAAAACATTTCTCTCGCAGGCAAGACCAACTTCTTCGAGAAGCGA 8708
Query 243724 GTCAGTGATTATCAACGCCCTGGTGTGATG 243753
|| | || || ||| ||||||| |||
Sbjct 8707 GTTGGCGACTACCAAAAAGCTGGTGTTATG 8678
Score = 84.2 bits (92), Expect = 5e-11
Identities = 191/281 (68%), Gaps = 6/281 (2%)
Strand=Plus/Minus
Query 242896 ATGTGGGATATGTATAAGAAGGCAGTGGCAACCTTTTGGACCACCGAGGAAGTTCCTCTG 242955
|| ||| | ||||| |||||||| | |||| |||| |||||| | |||||| | | ||
Sbjct 9591 ATCTGGCAGATGTACAAGAAGGCCGAGGCATCCTTCTGGACCGCAGAGGAAATCGATTTG 9532
Query 242956 --AACGCAGACGTCGTCGACTGGCGCGAGAAACTCAATGACGACGAACGTCATTTCATCA 243013
|| | | | || ||||||| | | | |||||||||||| || ||| | ||||||
Sbjct 9531 TCAAAGGAT-CTTCA-CGACTGGAACAACAGACTCAATGACGATGAGCGTTACTTCATCT 9474
Query 243014 AACACATTCTAGGTTTTTTCGCAGGCTCCGATGGTATTGTGATGGAAAATC-TGCAGACC 243072
||| |||| | || ||||| | |||||||| ||||| | ||||| | || || |
Sbjct 9473 CTCACGTTCTCGCATTCTTCGCCGCATCCGATGGAATTGTCAATGAAAACCTTGTCGAAC 9414
Query 243073 AACTTTAGTGTGGAAGTAACGGTTCCAGAGGCACGGCAATTTTATGCTTACCAAACATTC 243132
||| |||| || ||| |||| || ||||| || || | || ||||| |
Sbjct 9413 -GCTTCAGTGGAGAGGTACAAATTCCGGAAGCACGATGCTTCTACGGTTTCCAAATCATG 9355
Query 243133 AACGAATCTATCCATTCTGAACAATATGCTCTTCTTATCGA 243173
| ||| ||||| || ||| ||| | ||||| |||||
Sbjct 9354 ATGGAAAACATCCACTCGGAAACATACTCGCTTCTCATCGA 9314
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102776210375750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |