Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12-
31] 7,345 sequences; 40,250,382 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq4887 154 1e-32
>seq4887
Length=16554
Score = 154 bits (170), Expect = 1e-32
Identities = 413/629 (66%), Gaps = 2/629 (0%)
Strand=Plus/Plus
Query 94003 TGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCC 94062
||||| | || ||||| |||| || || || || ||| ||||| | |||||
Sbjct 10460 TGTGCTATGATTTCAAAGAACGCTGGTGGTATTGGTCTCAACATCCACAGAATCCGTGCT 10519
Query 94063 AGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGG 94122
| ||| ||||||| || || || || | ||| ||||| |||| |||||||| ||
Sbjct 10520 ACTGGTGCCTACATTGCAGGCACAAACGGTAACTCTAACGGTATCGTTCCTATGCTTCGA 10579
Query 94123 GTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTC 94182
|| ||||||||| | || | || || ||||| |||||| | | | ||| | ||
Sbjct 10580 GTTTTCAACAACACCGCTAGATATGTCGACCAAGGTGGTAACAAGCGCCCTGGTGCATTT 10639
Query 94183 GCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAAC 94242
|| || || || || || ||||| ||||| || | ||| | ||||| |||||||||
Sbjct 10640 GCCGTTTACCTTGAACCATGGCATGCGGATGTCTTTGAGTTCTTGGACCTCCGAAAGAAC 10699
Query 94243 CACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTT 94302
|||||||| || | || || | || |||||||| || |||||| | ||||| ||
Sbjct 10700 CACGGCAAAGAGGAAGTTAGAGCACGCGATCTCTTCTATGCCCTCTGGATTCCAGATCTC 10759
Query 94303 TTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCC 94362
|| ||||| || || || || ||| | ||||| || | || || || ||||||||
Sbjct 10760 TTCATGAAGCGTGTTGAAAAGAACGGAGACTGGACACTCATGTGCCCTAACGAATGTCCA 10819
Query 94363 GGACTGTCCGACGTTTGTGGATCGCGTTTTGAAGACT-TGTATGCTCGTTACGAATCGCA 94421
|| || | || || | ||| | | || || || | |||| ||||||| ||
Sbjct 10820 GGCTTGGCTGATGTCTATGG-TGATGAATTCGAGGCTCTCTATGAAGGTTACGAGAGACA 10878
Query 94422 GGGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACA 94481
|| || | | ||| || | ||| ||||| ||| || ||| | || | ||
Sbjct 10879 AGGTAAAGGTCGTAAGACCATCAAGGCTCAAAAGCTTTGGTATTCCATCCTTGAGGCCCA 10938
Query 94482 GGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCA 94541
| ||||| || | || | ||| | | ||| || || |||| ||| |||||
Sbjct 10939 GACTGAGACTGGAAACCCTTTCATGCTTTACAAAGATGCTTGCAACAAAAAGAGTAACCA 10998
Query 94542 GCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTC 94601
|| ||||||| ||| ||||| || ||||||| || || ||||| || || |
Sbjct 10999 AAAGAACCTCGGCACAATCCGTAGCTCCAACTTGTGCACAGAAATCGTCGAATACTCTGC 11058
Query 94602 TCCGGACGAGATTGCTGTGTGTAACCTGG 94630
||||| ||| ||||| |||||| |||
Sbjct 11059 ACCGGATGAGGTTGCTTGCTGTAACTTGG 11087
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494677778226200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |