Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12-
31] 7,345 sequences; 40,250,382 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq4745 134 3e-26
>seq4745
Length=15183
Score = 134 bits (148), Expect = 3e-26
Identities = 344/515 (67%), Gaps = 9/515 (2%)
Strand=Plus/Plus
Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899
|||||||| || |||| ||||| |||||||| ||||| || | | || ||||| |||
Sbjct 8694 TGGTAGTCGCCAACTCGCTTCTCGAAGAAGTTGGTCTTGCCTGCGAGAGAAATGTTTTCC 8753
Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCA-GCAG 47958
|||||| ||| || |||| || || ||| | ||| ||| | || | ||
Sbjct 8754 ATGAAGTCGAATGGATTGGCTGATCGGTAAACCT-TCTCATTACCAAGAGCAACAAGAAG 8812
Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018
| || |||||| |||| ||||||| ||| | ||||||||| | ||| |
Sbjct 8813 ACGGTCTGCGACGAACTCAATGTATTGCTTCATCAAATCCGAGTTCATGCCAAGGAGAG- 8871
Query 48019 CACGGGCAA-AGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077
||| | || ||| | || | || || | ||| ||||| || || || | || |
Sbjct 8872 CACATGGAAGAGCTTCCGTCAAGAATTCTTGCTCAATCTGGACAGCCTCTGTAATAACAT 8931
Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCG-CAGGTGCTTGGCATAGAGCATGCAGGCA 48136
|| |||| | | || | | ||| || |||| | |||||| ||||||
Sbjct 8932 CCTGAACG-GCTTGTTTGCTTGGGCGATGCTTCAAGTGCGAGA---AGAGCAGGCAGGCG 8987
Query 48137 AAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGC 48196
||||| | || | || ||||| ||| ||||||| ||||||| ||| |||||||| |
Sbjct 8988 AAGTCGGTATGAAGACCCTCGTCACGGGAGATGAGCTCGTTGGAAAAGGTGAGACCAGCC 9047
Query 48197 ATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCC 48256
|| | || | || |||||||||||||| | ||||| || ||| ||||||||| ||
Sbjct 9048 ATCAAGCCACGCTTCTTGAGCCAGAAAATAGAGGCGAAGGAACCACTGAAGAAGATACCT 9107
Query 48257 TCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAG 48316
|| || || ||||| ||| ||| | | | || | || |||||| || |||||
Sbjct 9108 TCAACGGCAGCGAATGCGACGAGACGTTGAGCAAAGGTAGAGTTCTTATCCTCAATCCAT 9167
Query 48317 GAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
|| |||||||| ||||||||||| ||||| ||
Sbjct 9168 CTAACAGCCCAGTCGGCCTTCTTCTTAATGCAAGG 9202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931447273644800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |