Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12-
31] 7,345 sequences; 40,250,382 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq4745 114 2e-20
>seq4745
Length=15183
Score = 114 bits (126), Expect = 2e-20
Identities = 303/466 (65%), Gaps = 7/466 (2%)
Strand=Plus/Minus
Query 25859 AGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCA 25918
||| | |||| |||| | || || || || || ||||| || || || ||||| ||||
Sbjct 9153 AGAACTCTACCTTTGCTCAACGTCTCGTCGCATTCGCTGCCGTTGAAGGTATCTTCTTCA 9094
Query 25919 GCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACT 25978
| ||||| || || | || |||||||||||| || || ||| | || || ||
Sbjct 9093 GTGGTTCCTTCGCCTCTATTTTCTGGCTCAAGAAGCGTGGCTTGATGGCTGGTCTCACCT 9034
Query 25979 TTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCT 26038
||||||||||||||||| | | ||||||||||| || | || || |||||||||||||
Sbjct 9033 TTTCCAACGAGCTCATCTCCCGTGACGAGGGTCTTCATACCGACTTCGCCTGCCTGCTCT 8974
Query 26039 ACACGGGCCACTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGG 26098
| || |||||| || || || | |||| | | | || | |||||
Sbjct 8973 TCTCG---CACTTGAAGCATCGCCCAAGCAAACAAGCCGTTCAGGATGTTATTACAGAGG 8917
Query 26099 CTGTGGAGATCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGA 26158
|||| |||| ||| | || || | |||||||
Sbjct 8916 CTGTCCAGATTGAGCAAGAATTCTTGACGGAAGCTCTTCCATGTGCTCTCCTTGGCATGA 8857
Query 26159 ACAACAGA-CTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGC-TGTGCCAGCT 26216
|| | || | |||| ||||||||||||| || || |||| ||| | ||| | |
Sbjct 8856 AC-TCGGATTTGATGAAGCAATACATTGAGTTCGTCGCAGACCGTCTTCTTGTTGCTCTT 8798
Query 26217 GGGACTCGCCAGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTT 26276
|| | | | | | ||| | | | || || |||||||| ||||||||||| || |
Sbjct 8797 GGTAAT-GAGAAGGTTTACCGATCAGCCAATCCATTCGACTTCATGGAAAACATTTCTCT 8739
Query 26277 GGAAGGGAAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322
| ||| |||||||||||||| || ||| | || |||||||| |||
Sbjct 8738 CGCAGGCAAGACCAACTTCTTCGAGAAGCGAGTTGGCGACTACCAA 8693
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928759520436800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |