Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12-
31] 7,345 sequences; 40,250,382 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq4599 154 2e-32
>seq4599
Length=27231
Score = 154 bits (170), Expect = 2e-32
Identities = 190/260 (73%), Gaps = 0/260 (0%)
Strand=Plus/Minus
Query 139260 AGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGT 139319
||||| | || |||||||| | ||||||||| || |||||| || || | ||| |||
Sbjct 13475 AGTCCTTGTGGTCCATGATAGACGGCATAGAATGCACTCATATTCGCCAGTAATGCCTGT 13416
Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379
||||| || | ||| || ||||| || ||||| | || || |||||||| |||||||
Sbjct 13415 GCTGTACAAACGTTGCTAGTTGCCTTTTCTCTGCGGATGTGTTGCTCTCTTGTTTGTAAG 13356
Query 139380 GCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGT 139439
|| ||||| ||| || ||| |||||| || ||| | || | || |||
Sbjct 13355 GCCAATCTCATTGCCTTGTTACCTAACCTGTCCTTGGATACACCAATGATACGCCCGGGT 13296
Query 139440 ATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCC 139499
|||||||||||||| ||||| | ||||||||||||||||||||||| ||||||||
Sbjct 13295 ATCTTTCTCTTATAGTTGTCGCTGACCGCAAAGAATGCAGCATGAGGACCCCCGTATCCA 13236
Query 139500 ATAGGAATACCAAACCTTTG 139519
| || | |||||| | |||
Sbjct 13235 AATGGTACACCAAAACGTTG 13216
Score = 127 bits (140), Expect = 2e-24
Identities = 272/394 (69%), Gaps = 13/394 (3%)
Strand=Plus/Minus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
|||||||| ||||| || ||||| || || || ||||| ||||||||||| ||||| ||
Sbjct 14618 ACACCAATGGGACCAACACCAGGTCCACCGCCGCCATGAGGAATACAGAAGGTCTTGTGA 14559
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
| ||| ||||| || ||||| || ||| |||| ||| || || | ||| |||
Sbjct 14558 AGATTAAGATGGCAGACATCGGCGCCAATCTCACCAGGTGAGCAAAGGCCAATCTGAGCA 14499
Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362
|| | || ||||| || | |||||| ||||| |||| | ||||| || | ||| | |
Sbjct 14498 TTCATGTTGGCACCGTCCATATATACTTGACCGCCATGTTGGTGAACAATATCACA-AGC 14440
Query 138363 TG-TCTGATGTTTGTTTCAAATACACC--ATGAGTCGATGGATATGTAATCATAATACAT 138419
| | |||| | | ||| |||||||| ||| | | | |||||||| ||||||||| |
Sbjct 14439 GGCTTTGATTTCCGGTTCGAATACACCGAATGTG-CTA-GGATATGTGATCATAATAGCT 14382
Query 138420 GAGAGTTC--AAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGC 138477
|||||| |||||| | ||| || || ||| | || || | ||| |
Sbjct 14381 CCGAGTTCCTCGCTGTATTTCT-CGCACTTAGCCTTCAAG-TCTGTCATATCCAGGTTCC 14324
Query 138478 C-ATCATCA--TCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAG 138534
| | | | ||||| || || |||||| ||||||||||||| | || |||||
Sbjct 14323 CTGACTTGATGTCACATTTCACGGTGACAACTCGCATTCCTGCCATGGCAGCTGAAGCAG 14264
Query 138535 GATTAGTTCCATGTGCTGACTCTGGTATCAGACA 138568
| || || || || |||||| |||| |||| |||
Sbjct 14263 GGTTGGTACCGTGAGCTGACACTGGAATCAAACA 14230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578945240709400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |