Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12-
31] 7,345 sequences; 40,250,382 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq894 116 5e-21
>seq894
Length=6424
Score = 116 bits (128), Expect = 5e-21
Identities = 141/191 (74%), Gaps = 1/191 (1%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| ||| |||| || ||||||||||| || ||||| ||||| || ||| ||
Sbjct 3438 AATGCAAATCTTTGTTAAGACTTTGACTGGAAAGACAATTACGTTAGAGGTGGAATCGTC 3379
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|||| ||| ||||| || | || || ||||| || || ||||| || || || ||
Sbjct 3378 AGATACCATTGATAACGTCAAGACAAAGATCCAAGACAAGGAGGGCATCCCACCCGACCA 3319
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||| ||||||||| || || ||||| | || ||| |||||| | || ||||| ||
Sbjct 3318 ACAACGATTGATTTTCGCTGGAAAGCAATTGGAGGATGGTAGAACTCTTTCGGATTACAA 3259
Query 156002 TATATCCAAAG 156012
|| || ||||
Sbjct 3258 CAT-TCAAAAG 3249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731804805002000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |