Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12-
31] 7,345 sequences; 40,250,382 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq3428 138 1e-26
seq1757 87.8 2e-11
>seq3428
Length=2966
Score = 138 bits (152), Expect = 1e-26
Identities = 96/109 (88%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| ||||||||||||||||||||||| || |||||| |||| |||||| | || ||||||
Sbjct 2616 GCTGCCAACTACCTCGACATCAAGCCACTTCTCGATGTTGGATGCAAGACCGTCGCCAAC 2675
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294
||||||||||| ||||| || ||||||||||| |||||||| |||||||
Sbjct 2676 ATGATCAAGGGAAAGTCCCCAGAGGAGATCCGAAAGACCTTCAACATCA 2724
>seq1757
Length=2536
Score = 87.8 bits (96), Expect = 2e-11
Identities = 109/148 (74%), Gaps = 1/148 (1%)
Strand=Plus/Minus
Query 19037 GCGCCAAG-AGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAG 19095
||| |||| | || ||||| || || || || || ||||| ||||||||||| |
Sbjct 1007 GCGACAAGCAAGATAGCATAGGAGGGACTGTAACCTGCGTCATCCGCAACGTGCCCAGCG 948
Query 19096 GCCTCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGA 19155
| ||||| ||||| || || ||||| || || || |||||| ||||||||||| |
Sbjct 947 GTCTCGGTGAGCCCTGTTTCGACAAAATGGAAGCAATGCTCGCGCACGCCATGCTCAGCA 888
Query 19156 TCCCGGCCACCAAGGGATTCGAGATTGG 19183
| || ||| ||||||| |||||| ||||
Sbjct 887 TTCCTGCCTCCAAGGGCTTCGAGGTTGG 860
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106536434903365
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |