Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12- 31] 7,345 sequences; 40,250,382 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq894 82.4 7e-11 >seq894 Length=6424 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||||| || ||||| || || || ||||| || || || | | | ||||| | Sbjct 3460 AAATGTAAAGTCGACTCCTTTTGAATGTTGTAGTCCGACAGGGTACGGCCA-TCCTCCAA 3518 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || ||| | ||||| || || || || || || |||||||||||||| || Sbjct 3519 CTGCTTACCAGCGAAGATGAGACGTTGTTGATCAGGTGGAATGCCTTCCTTGTCTTGAAT 3578 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | || | || || | | ||| || || | |||| || || || Sbjct 3579 CTTGCTCTTTACGTTGTCGATAGTATCAGATGACTCAACCTCCAAAGTGATTGTCTTTCC 3638 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| ||||| || |||||||||||||| Sbjct 3639 GGTAAGAGTCTTGACGAAAATCTGCAT 3665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483376415927800