Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12-
31] 7,345 sequences; 40,250,382 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq4745 123 4e-22
>seq4745
Length=15183
Score = 123 bits (136), Expect = 4e-22
Identities = 210/302 (70%), Gaps = 17/302 (6%)
Strand=Plus/Minus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| | |||||| || ||||||||||| ||||| |||||||| ||||| ||||
Sbjct 9592 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCATCCTTCTGGACCGCAGAGGAAATCGATT 9534
Query 1455835 TC-----GGCGC----CGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATT 1455885
| || | |||| | | || | || | ||||| ||||| | |
Sbjct 9533 TGTCAAAGGATCTTCACGACTGGAACAACAGA------CTCAATGACGATGAGCGTTACT 9480
Query 1455886 TCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTG 1455945
||||| ||||| ||||| || || |||||| |||||| || || || |||||
Sbjct 9479 TCATCTCTCACGTTCTCGCATTCTT-CGCCGCATCCGATGGAATTGTCAATGAAAACCTT 9421
Query 1455946 GCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAG 1456005
| || ||||| | |||||| ||| | || || ||||| | || ||||| |||||
Sbjct 9420 GTCGAACGCTTCAGTGGAGAGGTACAAATTCCGGAAGCACGATGCTTCTACGGTTTCCAA 9361
Query 1456006 ATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAG 1456065
||| || |||||||||||||| ||||| |||||||| || ||||| || ||| |||||
Sbjct 9360 ATCATGATGGAAAACATCCACTCGGAAACATACTCGCTTCTCATCGATACATACATCAAG 9301
Query 1456066 GA 1456067
||
Sbjct 9300 GA 9299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177102761249890
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |