Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12-
31] 7,345 sequences; 40,250,382 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq894 86.0 5e-12
>seq894
Length=6424
Score = 86.0 bits (94), Expect = 5e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
|||||| || | |||||||| ||||| || || ||||| | ||| |||| | || ||
Sbjct 3228 CACCAAGTGCAAGGTGCTCTCCTTTTGAATGTTGTAATCCGAAAGAGTTCTACCATCCTC 3287
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
| || || || || || || | || || ||||||| || | || ||| |||||
Sbjct 3288 CAATTGCTTTCCAGCGAAAATCAATCGTTGTTGGTCGGGTGGGATGCCCTCCTTGTCTTG 3347
Query 39195 GATTTTCTGT-TTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
||| || ||| |||| | | | ||||| ||| ||||| || | ||| || | |
Sbjct 3348 GATCTT-TGTCTTGACGTTATCAATGGTATCTGACGATTCCACCTCTAACGTAATTGTCT 3406
Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|||| |||| || |||||||||||||||||
Sbjct 3407 TTCCAGTCAAAGTCTTAACAAAGATTTGCAT 3437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429507148285985
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |