Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12-
31] 7,345 sequences; 40,250,382 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq1649 82.4 6e-11
>seq1649
Length=6120
Score = 82.4 bits (90), Expect = 6e-11
Identities = 141/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 29610 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGT 29669
||||||| || ||||||| || | ||| || ||| || || || || || | |
Sbjct 5232 TGGGAAACTCCCTCGGCTCCCGCTGCAACTGCGTCTTCAACGCCTCAACATGATCGACAT 5291
Query 29670 AGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAG 29729
||||||| ||||| |||| || || ||| || | || || || |||| |
Sbjct 5292 AGACGTGCGCATCCCCCATCGTATGCGTAAATGTGCCAGCCTCCAGATCGCACGCGTGCG 5351
Query 29730 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGT 29789
| | ||||| || || | | ||| ||||||||||| |||||||||||||| |||||||
Sbjct 5352 CTAACATGTGTGTTAGTAAGGCGTAACTGGCGATGTTGAAGGGCACCCCGAGTCCCATGT 5411
Query 29790 CCCCTGACCTCTGGTAGAGCTGGCA 29814
| | || | ||||| || |||||
Sbjct 5412 CGCAGGAGCGTTGGTATAGTTGGCA 5436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406126841412670
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |