Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12-
31] 7,345 sequences; 40,250,382 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq1649 82.4 6e-11
>seq1649
Length=6120
Score = 82.4 bits (90), Expect = 6e-11
Identities = 141/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 27104 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGT 27163
||||||| || ||||||| || | ||| ||||||| || || || ||||| | |
Sbjct 5232 TGGGAAACTCCCTCGGCTCCCGCTGCAACTGCGTCTTCAACGCCTCAACATGATCGACAT 5291
Query 27164 AGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAG 27223
||||||| || || |||| || || ||| || | || || || |||| |
Sbjct 5292 AGACGTGCGCATCCCCCATCGTATGCGTAAATGTGCCAGCCTCCAGATCGCACGCGTGCG 5351
Query 27224 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGT 27283
| | ||||| || || | | ||| ||||||||||| ||||| |||||||| |||||||
Sbjct 5352 CTAACATGTGTGTTAGTAAGGCGTAACTGGCGATGTTGAAGGGCACCCCGAGTCCCATGT 5411
Query 27284 CCCCCGACCTCTGGTAGAGCTGACA 27308
| | || | ||||| || || ||
Sbjct 5412 CGCAGGAGCGTTGGTATAGTTGGCA 5436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369474122754695
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |