Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31] 11,777 sequences; 51,994,176 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq9952 91.5 1e-13 >seq9952 Length=86145 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 101867 ACATAAAATTGACTTAATACATGACAAGGCGGCAACACCAT---TTTAGGAATGTCTGAA 101923 ||||| |||||| || | ||||||||| || || |||| ||| || || | Sbjct 30345 ACATAGAATTGAGCAAACATATGACAAGGTGGTAATGCCATGAGTTTT---ATATCAGCT 30401 Query 101924 ACATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCA-AT 101982 |||||||| |||| | || ||||| | ||| ||| || | || | | | || || Sbjct 30402 ACATTCCACGCACTTAATATAATCCTGCGATCCCAAGGATTATTCTTCA-ATTTCCAGAT 30460 Query 101983 CAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTC 102042 || | | |||||| || ||||||| |||| ||||||| | || || || |||| Sbjct 30461 CACTTCTGCTAATTGATCGACTCCTTGTCCTGTATAATCTGTCGCAGCATCTACATATGT 30520 Query 102043 TGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTC 102093 || |||||||||| ||| ||||||||||| || || || ||||| ||||| Sbjct 30521 GGCGCCGAAATGCCGCCATTGAAATCCATATACGGGACCTAGATCCCCTTC 30571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361199348825027