Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31]
11,777 sequences; 51,994,176 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq9952 91.5 1e-13
>seq9952
Length=86145
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 101867 ACATAAAATTGACTTAATACATGACAAGGCGGCAACACCAT---TTTAGGAATGTCTGAA 101923
||||| |||||| || | ||||||||| || || |||| ||| || || |
Sbjct 30345 ACATAGAATTGAGCAAACATATGACAAGGTGGTAATGCCATGAGTTTT---ATATCAGCT 30401
Query 101924 ACATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCA-AT 101982
|||||||| |||| | || ||||| | ||| ||| || | || | | | || ||
Sbjct 30402 ACATTCCACGCACTTAATATAATCCTGCGATCCCAAGGATTATTCTTCA-ATTTCCAGAT 30460
Query 101983 CAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTC 102042
|| | | |||||| || ||||||| |||| ||||||| | || || || ||||
Sbjct 30461 CACTTCTGCTAATTGATCGACTCCTTGTCCTGTATAATCTGTCGCAGCATCTACATATGT 30520
Query 102043 TGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTC 102093
|| |||||||||| ||| ||||||||||| || || || ||||| |||||
Sbjct 30521 GGCGCCGAAATGCCGCCATTGAAATCCATATACGGGACCTAGATCCCCTTC 30571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361199348825027
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |