Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31] 11,777 sequences; 51,994,176 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq655 87.8 2e-12 >seq655 Length=7676 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| ||| |||||| ||||||||| |||||||| |||| || ||| ||||| Sbjct 3258 AGCACCAAATGTAAAGTGCTCTCCTTTTGGATGTTATAATCCGAAAGAGTTCTACCGTCC 3317 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||| || || || ||| | || | | || || || || | ||||||||||| Sbjct 3318 TCCAATTGCTTTCCGGCAAAGATCAAACGTTGTTGATCGGGTGGAATACCTTCCTTGTCT 3377 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||||||| || || | | | ||||| | ||| ||||| ||||| ||| Sbjct 3378 TGGATCTTTGTCTTTACGTTATCAATGGTATCTGACGATTCCACTTCCAACGTAATTGTC 3437 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || || || || || || ||||| ||||||||| Sbjct 3438 TTTCCAGTCAAAGTCTTAACAAAGATTTGCATT 3470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422198592213332