Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31] 11,777 sequences; 51,994,176 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq655 104 2e-17 >seq655 Length=7676 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | || |||| |||||||| ||| || || |||||||| ||||| Sbjct 3470 TCCACCACGAAGACGAAGTACCAAATGTAAAGTCGATTCCTTTTGGATGTTGTAATCGGA 3529 Query 34222 CA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGG 34280 | | || ||| | || ||||||||||| || ||||||||||| || ||||| || | Sbjct 3530 TAAGGTG-CGGCCATCCTCCAACTGCTTACCAGCGAAAATGAGACGTTGCTGATCAGGTG 3588 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | | || |||||| || ||||| ||| | || | || | ||| | ||| |||| Sbjct 3589 GGATGCCCTCCTTATCTTGAATCTTAGTCTTCACATTATCGATGGTATCAGACGACTCGA 3648 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || | ||||| || || || || || || || || ||||||||||| Sbjct 3649 CCTCTAATGTGATTGTCTTTCCAGTAAGGGTCTTGACGAAGATCTGCAT 3697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323025628769120