Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31]
11,777 sequences; 51,994,176 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq655 82.4 6e-11
>seq655
Length=7676
Score = 82.4 bits (90), Expect = 6e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||| | | ||| | ||||| || || || ||||| || ||||||||||||
Sbjct 3699 CCACCACGAAGTCTGAGAACCAAATGGAGAGTCGATTCCTTTTGGATGTTGTAGTCGGAA 3758
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
||| ||| | || || |||||||| || ||||| ||||| || || || || |||||
Sbjct 3759 AGTGTGCGGCCATCTTCGAGTTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGAGGG 3818
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| ||||||||| || ||| || |||||| | | ||||| | || |||
Sbjct 3819 ATACCCTCCTTATCTTGAATCTTAGTCTTAACGTTGTCGATAGTGTCCGAAGATTCAACC 3878
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
|| | || || ||||| || || |||||||| ||
Sbjct 3879 TCAAGAGTGATAGTCTTTCCGGTAAGAGTCTTGAC 3913
Score = 82.4 bits (90), Expect = 6e-11
Identities = 83/108 (77%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| |||||||||||| || ||| | || || ||||| || || || ||
Sbjct 4019 CTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCAAA 4078
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
||||| ||||||||||| ||||| | ||||||||| ||| ||| ||
Sbjct 4079 GATCAAACGCTGTTGGTCAGGAGGGATACCCTCCTTATCCTGAATCTT 4126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395018493992317
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |