Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31]
11,777 sequences; 51,994,176 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq10763 96.9 7e-15
>seq10763
Length=10051
Score = 96.9 bits (106), Expect = 7e-15
Identities = 173/250 (69%), Gaps = 2/250 (1%)
Strand=Plus/Minus
Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851
||||||||| |||| || || || || ||| | |||||||||||| || |||||
Sbjct 4646 CCTCCAGCATTCTTAGAAATCATGGCACAAATCTTCAAAGTATCATAAATTCCATCAATA 4587
Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGG-GTGTGACTGTTCCACA 94910
||||| || | | | | | |||||||| || |||||||||| |||| ||| ||
Sbjct 4586 CTATCCTCCTTCATGTCAATGAGGAAGCATGAAGAAAGTTGGGCTTGTG-GTGTACCCGC 4528
Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970
|| ||||| || ||||| || ||||| || | | ||||| | | || |||||
Sbjct 4527 GGAGAAGAGTGTTGGAGAAGCGTGTGTAAAGTATTTGTTGGACATTAAGTTGTAGGTTTC 4468
Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTG 95030
|||| | | ||| || |||||||| || || || |||||||||||||| | ||
Sbjct 4467 AATGGCGCTCTCGATATCATCACCGTGAATACCAACGGCAACACGCATAATCATTTGTTG 4408
Query 95031 AGGGCGCTCA 95040
|| || |||
Sbjct 4407 TGGACGTTCA 4398
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989434678887035
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |