Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31] 11,777 sequences; 51,994,176 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq10763 96.9 7e-15 >seq10763 Length=10051 Score = 96.9 bits (106), Expect = 7e-15 Identities = 173/250 (69%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 ||||||||| |||| || || || || ||| | |||||||||||| || ||||| Sbjct 4646 CCTCCAGCATTCTTAGAAATCATGGCACAAATCTTCAAAGTATCATAAATTCCATCAATA 4587 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGG-GTGTGACTGTTCCACA 94910 ||||| || | | | | | |||||||| || |||||||||| |||| ||| || Sbjct 4586 CTATCCTCCTTCATGTCAATGAGGAAGCATGAAGAAAGTTGGGCTTGTG-GTGTACCCGC 4528 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 || ||||| || ||||| || ||||| || | | ||||| | | || ||||| Sbjct 4527 GGAGAAGAGTGTTGGAGAAGCGTGTGTAAAGTATTTGTTGGACATTAAGTTGTAGGTTTC 4468 Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTG 95030 |||| | | ||| || |||||||| || || || |||||||||||||| | || Sbjct 4467 AATGGCGCTCTCGATATCATCACCGTGAATACCAACGGCAACACGCATAATCATTTGTTG 4408 Query 95031 AGGGCGCTCA 95040 || || ||| Sbjct 4407 TGGACGTTCA 4398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989434678887035