Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31]
11,777 sequences; 51,994,176 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq655 111 2e-19
>seq655
Length=7676
Score = 111 bits (122), Expect = 2e-19
Identities = 149/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 142975 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTC 143034
||| ||||| | || ||||| ||||| |||||||| ||| | ||||| |||||
Sbjct 3716 AACCAAATGGAGAGTCGATTCCTTTTGGATGTTGTAGTCGGAAAGTGTGCGGCCATCTTC 3775
Query 143035 GAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 143094
||||||||||||||| |||||| |||||||||||| ||||| || || || || || |
Sbjct 3776 GAGTTGTTTACCAGCGAAGATCAAACGTTGCTGATCAGGAGGGATACCCTCCTTATC-TT 3834
Query 143095 AATTTTTTGTTTTAGC-TGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCT 143153
| | || || ||| | | || | ||||||| | ||| || |||| ||| | ||||
Sbjct 3835 GAATCTTAGTCTTAACGTTGTCGATAGTGTCCGAAGATTCAACCTCAAGAGTGATAGTCT 3894
Query 143154 TGCCGGTCAATGTTTTTACGAATAT 143178
| ||||| | || || |||| |||
Sbjct 3895 TTCCGGTAAGAGTCTTGACGACTAT 3919
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506939761142640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |