Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31] 11,777 sequences; 51,994,176 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq655 98.7 9e-16 >seq655 Length=7676 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || ||||||| ||||| |||||||| |||||||||||| Sbjct 3471 CCACCACGAAGACGAAGTACCAAATGTAAAGTCGATTCCTTTTGGATGTTGTAATCGGAT 3530 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| | |||||| || ||| | || | ||| ||||| || || ||| Sbjct 3531 AAGGTGCGGCCATCCTCCAACTGCTTACCAGCGAAAATGAGACGTTGCTGATCAGGTGGG 3590 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || || || ||| | | || | ||||| | ||||||| Sbjct 3591 ATGCCCTCCTTATCTTGAATCTTAGTCTTCACATTATCGATGGTATCAGACGACTCGACC 3650 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || || || || ||||| |||||||| Sbjct 3651 TCTAATGTGATTGTCTTTCCAGTAAGGGTCTTGACGAAGATCTGCAT 3697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471943313815680