Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31]
11,777 sequences; 51,994,176 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq10338 98.7 2e-15
>seq10338
Length=29807
Score = 98.7 bits (108), Expect = 2e-15
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 251542 TGATATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCC 251601
|| || |||| ||||| |||||||| || | |||||| | ||||| || |||
Sbjct 13432 TGGTAATCAGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCGAGAGAAATGTTTTCC 13373
Query 251602 ATGAAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATG 251661
||||||||||| ||||| |||| | ||| ||| || ||||| || | ||||| |
Sbjct 13372 ATGAAGTCGAATGGGTTGGTGGAACGGTAAACCTTTTCATTACCAAGGGCAA-GAAGAAG 13314
Query 251662 -CGGTCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACG 251720
|||||||| || ||||| | || ||| |||||| || ||||||||||||| | |
Sbjct 13313 ACGGTCTGCGACGAACTCAATGTATTGTTTCATCAGATCCGAGTTCATGCCAAGGAGAGC 13254
Query 251721 ACAAGGAATTGCCTCACAGATGAATTCCTTTTCGTTGGCAACTGCCTC 251768
||| |||| || || | |||||||| || | | ||| |||||
Sbjct 13253 ACATGGAAGAGCTTCGGTCAAGAATTCCTGCTCAATTGTAACAGCCTC 13206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027681706814457
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |