Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31]
11,777 sequences; 51,994,176 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq10763 96.9 3e-15
seq655 91.5 1e-13
>seq10763
Length=10051
Score = 96.9 bits (106), Expect = 3e-15
Identities = 146/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 155222 CAAAGTTTCGTACATTCCTTTGATGCTGTCTTCTTTCAACGTCAACAAGAAA-CACGAAG 155280
|||||| || || ||||| | || || || || |||| ||||| || || || ||||
Sbjct 4611 CAAAGTATCATAAATTCCATCAATACTATCCTCCTTCAT-GTCAATGAGGAAGCATGAAG 4553
Query 155281 ATAATTGAGGTTGAGGGCAGCCGGCCGCAAATAATGTAGGACTAGCGTGTGTAAACATTT 155340
| | ||| | ||| || || || | || | ||| ||| |||||||||||| ||
Sbjct 4552 AAAGTTGGGCTTGTGGTGTACCCGCGGAGAAGAGTGTTGGAGAAGCGTGTGTAAAGTATT 4493
Query 155341 TGTTGGCGGTTAAGTTGTAAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTATACCGA 155400
|||||| |||||||||| ||||| |||||| || || ||| |||||| ||||| |
Sbjct 4492 TGTTGGACATTAAGTTGTAGGTTTCAATGGCGCTCTCGATATCATCACCGTGAATACCAA 4433
Query 155401 TCGCCACGCGCATCAGCATGTGTTG 155425
|| || ||||| | ||| |||||
Sbjct 4432 CGGCAACACGCATAATCATTTGTTG 4408
>seq655
Length=7676
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || | ||| | |||||||| ||||| ||||||||||| | | |||||| | ||
Sbjct 3485 AAGTACCAAATGTAAAGTCGATTCCTTTTGGATGTTGTAATCGGATAAGGTGCGGCCATC 3544
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|| | |||||| || || ||||||| || ||||| || || || || || || || ||
Sbjct 3545 CTCCAACTGCTTACCAGCGAAAATGAGACGTTGCTGATCAGGTGGGATGCCCTCCTTATC 3604
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
||| || || ||| ||| || | |||||| | || || |||| || | ||
Sbjct 3605 TTGAATCTTAGTCTTCACATTATCGATGGTATCAGACGACTCGACCTCTAATGTGATTGT 3664
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| || || | || || ||||| || |||||
Sbjct 3665 CTTTCCAGTAAGGGTCTTGACGAAGATCTGCAT 3697
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499571246039880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |