Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31] 11,777 sequences; 51,994,176 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq10763 84.2 2e-11 >seq10763 Length=10051 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 154314 GTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGG 154373 || ||||| || ||||| || ||| ||||| ||||| ||| | | ||| | | | Sbjct 4535 GTACCCGCGGAGAAGAGTGTTGGAGAAGCGTGTGTAAAGTATTTGTTGGACATTAAGTTG 4476 Query 154374 TACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGC 154433 || ||||| |||||| ||||||||||| |||||||| || | || || ||||| | | Sbjct 4475 TAGGTTTCAATGGCGCTCTCGATATCATCACCGTGAATACCAACGGCAACACGCATAATC 4416 Query 154434 ATGTGCTGCGGACGTTCGGCGACT 154457 || || || |||||||| || ||| Sbjct 4415 ATTTGTTGTGGACGTTCAGCAACT 4392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496189343971440