Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31] 11,777 sequences; 51,994,176 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq655 102 6e-17 >seq655 Length=7676 Score = 102 bits (112), Expect = 6e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 14986 TCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTAT 15045 || ||||| ||||| ||||| ||| |||| |||| || ||||| || || || | Sbjct 3279 TCCTTTTGGATGTTATAATCCGAAAGAGTTCTACCGTCCTCCAATTGCTTTCCGGCAAAG 3338 Query 15046 ATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATT 15105 |||||||| ||||| ||| |||||| ||||||||||| || || | ||||| | Sbjct 3339 ATCAAACGTTGTTGATCGGGTGGAATACCTTCCTTGTCTTGGATCTTTGTCTTTACGTTA 3398 Query 15106 TCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACA 15165 || || ||||| ||| || || || ||||| || || || |||| ||| || ||| Sbjct 3399 TCAATGGTATCTGACGATTCCACTTCCAACGTAATTGTCTTTCCAGTCAAAGTCTTAACA 3458 Query 15166 AAAATTTGCAT 15176 || |||||||| Sbjct 3459 AAGATTTGCAT 3469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357340702744445