Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31]
11,777 sequences; 51,994,176 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq10129 168 8e-37
>seq10129
Length=31709
Score = 168 bits (186), Expect = 8e-37
Identities = 213/293 (73%), Gaps = 0/293 (0%)
Strand=Plus/Minus
Query 153747 GATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCAT 153806
|||||||| | || | | ||| | || ||| | || | |||||||| ||||| |||
Sbjct 8538 GATATTGCATTTGGAAATGCTCAACGTTTCGGTGTACCATTTGGATATGGTGGTCCCCAT 8479
Query 153807 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 153866
|| ||||||||||| | |||||||||||| |||||||||| || | || | |||
Sbjct 8478 GCCGCATTCTTTGCGGTTAGTGACAAGTATAAGCGAAAGATACCCGGACGTATCATCGGT 8419
Query 153867 CAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 153926
|| ||||| |||| |||| ||| ||||| || |||| || ||||||||
Sbjct 8418 GTATCCAAGGATAGATTAGGTGATAAGGCAATGAGATTGGCCTTACAAACAAGAGAGCAA 8359
Query 153927 CATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAAT 153986
|||||| ||||||| || ||||| || ||| | |||||||| |||||| |||| || ||
Sbjct 8358 CATATCCGGAGAGAAAAGGCAACTAGCAACGTTTGCACAGCGCAGGCATTGCTAGCCAAC 8299
Query 153987 ATGTCTGGATTCTATGCAGCATATCATGGTGCAGATGGACTACATGCTATAGC 154039
||| || ||||||||| | |||||||| || | ||||| | ||||| ||
Sbjct 8298 ATGAGTGCATTCTATGCTGTTTATCATGGACCACAAGGACTCAAGGCTATTGC 8246
Score = 120 bits (132), Expect = 4e-22
Identities = 169/235 (72%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 154871 TATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGA-CAGATAT 154929
||| ||||| |||||||| ||| ||||||||| ||| | | || | | | | | |
Sbjct 7348 TATCATGATCACATACCCTAGCACATTTGGTGTATTCGAACCGGAAATCAAAGCCGCT-T 7290
Query 154930 GTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCAC 154989
| | |||||||| | |||| ||||| ||||| | ||||| || || | |||||||
Sbjct 7289 GCGATATCGTTCACCAACATGGCGGTCAAGTATACATGGATGGTGCCAACATGAATGCAC 7230
Query 154990 AGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATA 155049
| | || || |||| ||||| ||| || ||||| || ||||| ||| | || |
Sbjct 7229 AAATCGGTCTTTGCTCACCAGGTGAGATTGGCGCTGATGTCTGCCATCTTAACCTTCACA 7170
Query 155050 AAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104
| || ||||||||||| ||||| ||||| || || ||||| |||||||| |||||
Sbjct 7169 AGACTTTCTGTATTCCTCATGGTGGTGGTGGACCAGGCGTCGGTCCTATTGGTGT 7115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579127532635680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |